zhaisilong / awesome-peptideLinks
List of papers about Peptide research using Deep Learning
☆27Updated 4 months ago
Alternatives and similar repositories for awesome-peptide
Users that are interested in awesome-peptide are comparing it to the libraries listed below
Sorting:
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆34Updated 10 months ago
- This Code is for Fragment-wise 3D Structure-based Molecular Generation with Reliable Geometry☆27Updated 5 months ago
- ☆46Updated 5 months ago
- 3D-MCTS: A general structure-based molecule generation method with MCTS.☆43Updated last year
- ☆32Updated 2 years ago
- ☆58Updated last year
- ☆77Updated last year
- ☆37Updated 5 months ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆15Updated last year
- ☆50Updated 3 months ago
- DeepRMSD+Vina is a computational framework that integrates ligand binding pose optimization and screening.☆42Updated last year
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆38Updated 2 months ago
- Fully automated high-throughput MD pipeline☆69Updated this week
- POLYGON VAE For de novo Polypharmacology☆38Updated 5 months ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆46Updated 2 years ago
- Workflow to clean up and fix structural problems in protein-ligand binding datasets☆52Updated 3 months ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆54Updated last year
- Official Github for "PharmacoNet: deep learning-guided pharmacophore modeling for ultra-large-scale virtual screening" (Chemical Science)☆76Updated last month
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆72Updated this week
- Incorporation of conformational space profile into molecular representation learning, and its application to drug discovery, including vi…☆55Updated last month
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆25Updated 3 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆34Updated 5 months ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year
- ☆35Updated 2 years ago
- my own studied materials and scripts☆52Updated 4 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆70Updated 2 weeks ago
- ☆27Updated 2 years ago
- ☆27Updated 10 months ago
- Implementation of DiffDock-Pocket: Diffusion for Pocket-Level Docking with Side Chain Flexibility☆32Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated 6 months ago