STRIDES / NIHCloudLabGCPLinks
Documentation and tutorials on using GCP for biomedical research
☆33Updated 5 months ago
Alternatives and similar repositories for NIHCloudLabGCP
Users that are interested in NIHCloudLabGCP are comparing it to the libraries listed below
Sorting:
- Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NI…☆80Updated 4 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 4 months ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Python packaging for CPTAC data☆102Updated last year
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆84Updated 11 months ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆33Updated 6 years ago
- Code for paper "A deep profile of gene expression across 18 human cancers"☆27Updated 10 months ago
- The code for gene set analysis by accessing domain databases☆77Updated last week
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- 🏺 Exploring novel tumor epitope identification☆36Updated 5 years ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆55Updated last week
- Workshop in omics integration and systems biology☆83Updated 10 months ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆48Updated last year
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆86Updated last week
- ☆78Updated 3 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆29Updated 10 months ago
- Clinical sequencing-based primary site classifier☆35Updated last year
- ☆55Updated 2 years ago
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆64Updated 2 months ago
- SIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data☆10Updated 3 weeks ago
- ☆83Updated 10 months ago
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆26Updated last year
- ☆18Updated 3 weeks ago
- ☆41Updated this week
- My youtube programming scripts☆58Updated 8 months ago
- Machine Learning in Medical Bioinformatics☆25Updated 5 months ago
- Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration☆107Updated 3 weeks ago
- ☆11Updated 11 months ago
- ☆34Updated 2 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago