Rostlab / ProtTransLinks
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
☆10Updated 3 years ago
Alternatives and similar repositories for ProtTrans
Users that are interested in ProtTrans are comparing it to the libraries listed below
Sorting:
- ☆72Updated 5 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆113Updated last year
- Fitness landscapes for antibodies☆83Updated last week
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆74Updated 7 months ago
- ☆53Updated last year
- Antibody-specific masked language model☆59Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆105Updated 3 months ago
- ☆68Updated 3 years ago
- AlphaBind code + model accompanying pre-print☆75Updated last month
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆46Updated last year
- Enzyme Activity Prediction of Sequence Variants onNovel Substrates using Improved Substrate Encodings and Convolutional Pooling☆18Updated 2 years ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆54Updated 8 months ago
- ☆52Updated 3 weeks ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- AlphaFold-initiated replica exchange protein docking☆84Updated 3 months ago
- Code for running RFdiffusion☆13Updated 5 months ago
- AbLang: A language model for antibodies☆147Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 2 years ago
- ☆49Updated 2 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆163Updated 2 years ago
- pyFoldX: python bindings for FoldX.☆48Updated 4 years ago
- Predict the structure of immune receptor proteins☆151Updated 7 months ago
- Code for ColabDock paper☆144Updated 4 months ago
- Protein Structure Analysis☆55Updated 2 months ago
- ☆107Updated last year
- ☆21Updated last week
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- ☆19Updated last year