Rostlab / ProtTransLinks
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
☆10Updated 3 years ago
Alternatives and similar repositories for ProtTrans
Users that are interested in ProtTrans are comparing it to the libraries listed below
Sorting:
- ☆70Updated 4 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Fitness landscapes for antibodies☆75Updated this week
- Antibody-specific masked language model☆57Updated 2 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆69Updated 6 months ago
- Transformer Based Language Model for Peptide Property Prediction☆46Updated last year
- AlphaBind code + model accompanying pre-print☆70Updated 2 weeks ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆60Updated last year
- AlphaFold-initiated replica exchange protein docking☆84Updated 2 months ago
- Public repository describing training and testing of AntiBERTa.☆60Updated 2 years ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5…☆31Updated last year
- ☆51Updated last year
- Code for ColabDock paper☆142Updated 3 months ago
- ☆51Updated last week
- ☆86Updated 2 weeks ago
- ☆112Updated last year
- ☆123Updated 2 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆139Updated this week
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆53Updated 7 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Predict the structure of immune receptor proteins☆148Updated 6 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 2 years ago
- ☆72Updated 6 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆46Updated 3 weeks ago
- ☆48Updated last year
- open source code for Tencent tFold☆106Updated 4 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆155Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 5 years ago