ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
☆12Jun 2, 2022Updated 4 years ago
Alternatives and similar repositories for ProtTrans
Users that are interested in ProtTrans are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5…☆37Mar 4, 2024Updated 2 years ago
- MoonDAO documentation, planning, project notes, and other reference material.☆11Sep 23, 2026Updated 2 weeks ago
- AntiRef: reference clusters of human antibody sequences☆12Apr 18, 2024Updated 2 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,325May 22, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Multi-task and masked language model-based protein sequence embedding models.☆106Jun 16, 2021Updated 5 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆41Aug 29, 2025Updated last year
- CircuitPython pixel graphics drawing library☆16Apr 23, 2026Updated 5 months ago
- An Obsidian plugin for web3 composition☆14Oct 28, 2024Updated last year
- Code for the antibody deep learning paper.☆16Feb 28, 2022Updated 4 years ago
- Drug Target Interaction Prediction Using Protein Binding Sites And Drug Fragments☆12Aug 11, 2025Updated last year
- TFN layers built using Tensorflow 2☆15Jul 15, 2021Updated 5 years ago
- We propose PepBCL, a novel BERT (Bidirectional Encoder Representation from Transformers)-based Contrastive Learning framework to predict …☆19Mar 29, 2023Updated 3 years ago
- A python tool for numerically encoding protein sequences based on PSSM profile☆11Jun 25, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Drawing Hilbert curve iteratively☆24May 21, 2021Updated 5 years ago
- ☆13Jun 18, 2018Updated 8 years ago
- various web scrapers as examples☆17Oct 10, 2020Updated 6 years ago
- Recordings and transcriptions of ASMR artists compiled for the purpose of training voice synthesizers☆12Feb 7, 2022Updated 4 years ago
- 🎤 Revocalize AI API: Sing like your favorite artist with our powerful AI voice synthesizer. Real-time auto-tuning 🎵, emotional range ca…☆13Oct 1, 2023Updated 3 years ago
- ☆14Mar 6, 2022Updated 4 years ago
- ☆15Sep 14, 2021Updated 5 years ago
- ☆23Jan 18, 2026Updated 8 months ago
- Dependent Multi-Task Learning for the Segmentation of Thoracic Organs at Risk in CT Images☆11Jun 11, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official repository of ReactZyme☆46Oct 12, 2024Updated last year
- ☆23Jun 24, 2022Updated 4 years ago
- Repository for Ruff, King et al. Molecular grammars of predicted intrinsically disordered regions that span the human proteome☆20Dec 29, 2025Updated 9 months ago
- Public version for DistPepFold☆10Jul 17, 2025Updated last year
- Easy to use and efficient implementations of Protein Language Models☆59Oct 1, 2026Updated last week
- Tools to build coarse grained models and perform simulations with OpenMM☆24Aug 12, 2026Updated last month
- ☆23Jul 4, 2021Updated 5 years ago
- examples to run monorail externally☆21Mar 7, 2026Updated 7 months ago
- Prompt engineering design for LLM☆17Jun 20, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Get protein embeddings from protein sequences☆510Apr 28, 2023Updated 3 years ago
- ☆11Feb 21, 2023Updated 3 years ago
- Workshop materials☆18Oct 21, 2025Updated 11 months ago
- STRIDE: Protein secondary structure assignment from atomic coordinates☆16Apr 25, 2022Updated 4 years ago
- Drug-Likeness☆16Dec 11, 2022Updated 3 years ago
- ☆17Jan 29, 2025Updated last year
- ☆17Dec 13, 2020Updated 5 years ago