Utility to run RosettaCommons tools
☆15May 5, 2026Updated 5 months ago
Alternatives and similar repositories for rc
Users that are interested in rc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Updated this week
- A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies.☆32Updated this week
- Multi platform molecular dynamics simulator for coarse-grained MD simulation on GPU.☆15Oct 2, 2026Updated last month
- Python script to run Vina-GPU against the AlphaFold proteome of any species☆10Apr 23, 2026Updated 6 months ago
- ☆10Aug 3, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆20Dec 5, 2025Updated 10 months ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 9 months ago
- Bayesian Optimization for protein design and mining☆28Jul 2, 2026Updated 4 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆149Feb 1, 2026Updated 9 months ago
- When you face some problem in drug discovery, just delete☆13Aug 3, 2024Updated 2 years ago
- This repository extends scanpy to handle flow and mass cytometry data.☆10Aug 5, 2022Updated 4 years ago
- Implementation of the Paper "iScore: A ML-Based Scoring Function for de novo Drug Discovery" by S.J. Mahdizadeh, and L.A. Eriksson.☆19Jun 26, 2026Updated 4 months ago
- Design scripts corresponding to "Computational design of sequence-specific DNA-binding proteins."☆23Oct 23, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A bunch of shell utilities for dealing the silent files☆82Apr 6, 2026Updated 6 months ago
- Several QM/MM tutorials for biological simulations adapted to CP2K. Tutorials adapted from AMBER, GMX, NAMD and CPMD softwares.☆26Oct 18, 2019Updated 7 years ago
- ☆24Aug 6, 2026Updated 2 months ago
- ESMDynamic repo☆39Jun 26, 2026Updated 4 months ago
- Rotamer Interaction Field Python Libraries for Computational Protein Design☆14Feb 2, 2018Updated 8 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Predicting cleaved peptides in protein sequences☆11Jul 3, 2024Updated 2 years ago
- A python package for the prediction of chemical shieldings of organic solids and beyond.☆23Sep 30, 2026Updated last month
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆76Aug 11, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The public repository for the Core library of the Masala software suite. Masala is a set of free and open-source tools for biomolecular …☆10Oct 7, 2026Updated 3 weeks ago
- The Rosetta Bio-macromolecule modeling package. Available through license with the University of Washington.☆481Oct 21, 2026Updated last week
- Interface enabling use of ANI-style, and other NN-IPs in the Amber molecular dynamics software suite. Works with both Amber engines, sand…☆18Oct 27, 2026Updated last week
- Code for the benchmarking single-cell foundation models (scGPT, scBERT, and Geneformer) for cell-type annotation task using skewed single…☆16Dec 8, 2024Updated last year
- A generalized computational framework for biomolecular modeling.☆460Oct 22, 2026Updated last week
- A program analyzing 3D protein structures from PDB to generate 2D binding motifs☆17Jul 18, 2021Updated 5 years ago
- Nextflow pipeline to do protein design tasks at the end of 2025.☆12Oct 26, 2026Updated last week
- Energy-guided binder design pipeline built on BindCraft☆19Jun 6, 2025Updated last year
- Automated Cytometric Gating with Human-Level Performance Using Bivariate Segmentation☆15Sep 15, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Complete saturation mutagenesis of a protein using ESM☆19Feb 20, 2024Updated 2 years ago
- ☆11Nov 11, 2025Updated 11 months ago
- ☆22Dec 3, 2024Updated last year
- Potts model-based protein sequence design☆120Jul 1, 2026Updated 4 months ago
- EvolveX, a de novo antibody computational design pipeline.☆24Sep 18, 2025Updated last year
- ☆93Sep 30, 2026Updated last month
- Supplementary datasets and scripts for the METL manuscript☆10Sep 18, 2025Updated last year