This is the repository for the Python based program for automated deep phenotype analysis of clinical information using large language models (LLMs) and Retrieval Augmented Generation (RAG)
☆28Sep 30, 2025Updated 7 months ago
Alternatives and similar repositories for RAG-HPO
Users that are interested in RAG-HPO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16May 19, 2025Updated 11 months ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆37Apr 26, 2026Updated last week
- Rareservoir Database Tools☆16Mar 13, 2023Updated 3 years ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 3 years ago
- Classifier of pathogenic non-coding variants in Mendelian diseases☆11Feb 6, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 2 years ago
- Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:☆17Jul 22, 2024Updated last year
- ☆11Mar 23, 2026Updated last month
- Mapping toolset to migrate/transform existing datasets to HL7 FHIR☆17Apr 29, 2026Updated last week
- Java REST API for iRODS☆12Nov 9, 2023Updated 2 years ago
- ☆14Apr 14, 2026Updated 3 weeks ago
- ☆11Oct 21, 2016Updated 9 years ago
- Repository for the family history/pedigree project☆13Feb 24, 2026Updated 2 months ago
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A rules-based transformation engine that allows exporting data in REDCap as FHIR resources.☆12Apr 12, 2023Updated 3 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 5 years ago
- Milton based WebDav interface for iRODS☆12May 9, 2017Updated 8 years ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆15Apr 17, 2026Updated 2 weeks ago
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- Ontology for representing scientific evidence and provenance information☆53Oct 2, 2025Updated 7 months ago
- <hr> for your terminal; define a thematic change in content☆13Jun 8, 2024Updated last year
- do some exercise☆14Dec 2, 2025Updated 5 months ago
- ☆14Dec 2, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 6 months ago
- Services and guidelines for normalizing variants☆15Apr 9, 2026Updated 3 weeks ago
- Identification of Human Phenotype Entities☆11Nov 2, 2018Updated 7 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆48Updated this week
- The Snorocket Description Logic classifier for EL++ with concrete domains support☆24Oct 7, 2021Updated 4 years ago
- Analysis of Multivariate Event Times https://kkholst.github.io/mets/☆14Updated this week
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆17Jun 14, 2023Updated 2 years ago
- PhenoTagger☆65Jan 24, 2024Updated 2 years ago
- A3 - FHIR-native ETL+Q Prototype☆14Dec 14, 2020Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Sanger Cellular Genetics single-cell ATAC-seq pipeline.☆13Aug 25, 2023Updated 2 years ago
- mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes☆22Nov 13, 2025Updated 5 months ago
- ☆27Aug 25, 2025Updated 8 months ago
- franklin library for NGS sequencing analysis.☆25Oct 10, 2012Updated 13 years ago
- Python Phenopacket Tools☆17Nov 3, 2025Updated 6 months ago
- a web application to search and navigate the Human Phenotype Ontology (HPO)☆14Apr 22, 2026Updated 2 weeks ago
- Network Embedding All the Things☆18Oct 4, 2022Updated 3 years ago