bio2bel / drugbank
A Bio2BEL package for DrugBank (https://www.drugbank.ca)
☆9Updated 4 years ago
Alternatives and similar repositories for drugbank:
Users that are interested in drugbank are comparing it to the libraries listed below
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Updated 5 years ago
- A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials☆18Updated 5 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆58Updated last year
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆26Updated 7 months ago
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Updated 4 months ago
- A project to capture biological pathway data from academic papers☆29Updated 2 weeks ago
- ☆11Updated 5 years ago
- ☆20Updated 3 months ago
- A high throughput automated drug discovery pipeline.☆29Updated 6 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆20Updated last week
- Model-based Analysis of Protein Degradability☆10Updated 3 years ago
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆13Updated 2 weeks ago
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Updated 2 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 3 years ago
- Drug-disease proximity based therapeutic effect screening and analysis☆19Updated 7 years ago
- Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…☆9Updated 4 years ago
- Template for creating a BioCypher-driven knowledge graph☆12Updated 2 months ago
- 🪝 What's the latest version for each database?☆27Updated this week
- Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV …☆19Updated last year
- ☆15Updated last year
- Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers☆14Updated 6 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆32Updated 7 months ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- Python script for processing DrugBank XML to MySQL-ready CSV files☆16Updated 7 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆33Updated last year
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆19Updated 7 months ago
- MILTON: Disease prediction with biomarkers and augmented PheWAS analyses☆29Updated 4 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 3 years ago