HazyResearch / ddbiolibLinks
DeepDive Biomedical Tools
☆14Updated 8 years ago
Alternatives and similar repositories for ddbiolib
Users that are interested in ddbiolib are comparing it to the libraries listed below
Sorting:
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆25Updated 9 years ago
- ☆15Updated 7 years ago
- SNP Extraction Tool for Human Variations☆27Updated last year
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- all-paths graph kernel for protein-protein interaction extraction☆12Updated 11 years ago
- Retrieve and process PubTator annotations☆44Updated last year
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆20Updated 8 years ago
- Computing term cooccurrence in MEDLINE☆18Updated 4 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 11 months ago
- A subgroup discovery tool that can use ontological domain knowledge (RDF graphs) in the learning process. Subgroup descriptions contain t…☆12Updated 7 years ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- ☆13Updated 6 years ago
- ☆32Updated 6 years ago
- Semantic Similarity Measures using Disjunctive Shared Information☆25Updated 11 months ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- ☆21Updated 8 years ago
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Updated 8 years ago
- Concept2vec Metrics for Evaluating Quality of Embeddings for Ontological Concepts☆14Updated 6 years ago
- ☆16Updated 7 years ago
- Link Prediction using Knowledge Embedding in Tensorflow☆13Updated 8 years ago
- Learn how to construct graphs given representative examples☆13Updated 3 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- Biomedical Relation Extraction for Transcription Factor and Gene / Gene Products (part of a Master Thesis at Rostlab, TUM)☆12Updated 7 years ago
- Discourse Graph Annotation Tool (DiGAT)☆9Updated 9 years ago
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated last year
- Multiclass and multilabel datasets in Vowpal Wabbit format☆12Updated 7 years ago
- Network inference by fusing data from diverse distributions☆14Updated 8 years ago