computationalpathologygroup / WSICS
WSICS
☆30Updated 5 years ago
Alternatives and similar repositories for WSICS:
Users that are interested in WSICS are comparing it to the libraries listed below
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆52Updated 5 years ago
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- Re-stained whole slide image alignment☆32Updated last year
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆52Updated last year
- Interactive Segmentation of Nucleus☆61Updated 2 years ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆48Updated last year
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28Updated 5 years ago
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 5 years ago
- ☆30Updated 5 years ago
- ☆40Updated 3 years ago
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆69Updated 9 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆70Updated 2 months ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆78Updated 2 years ago
- ☆35Updated last year
- ☆24Updated 2 years ago
- ☆15Updated 9 months ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Updated 3 years ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆37Updated 4 years ago
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆30Updated 3 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Updated 5 years ago
- ☆65Updated 4 years ago
- PFA-ScanNet: Pyramidal Feature Aggregation With Synergistic Learning for Breast Cancer Metastasis Analysis (Architecture Only Pytorch Imp…☆22Updated 5 years ago
- Python scripts for automatic Whole-Slide Image preprocessing.☆36Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆66Updated 2 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆33Updated last year
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆87Updated 5 years ago