Alternatives and similar repositories for Biomedical-ML-with-Python:

Users that are interested in Biomedical-ML-with-Python are comparing it to the libraries listed below

• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆19Updated 2 months ago
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆27Updated 4 years ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 5 years ago
• tavareshugo / data-carpentry-rnaseq
  ☆22Updated 4 years ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 2 months ago
• grimmlab / BookChapter-RNA-Seq-Analyses
  Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis
  ☆40Updated 3 years ago
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆28Updated last year
• ACSoupir / Bioinformatics_YouTube
  The Github Page with some of the information pertaining to the YouTube videos.
  ☆12Updated 4 years ago
• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆52Updated 3 months ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆20Updated last year
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆68Updated 2 weeks ago
• AlexsLemonade / training-modules
  A collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.
  ☆67Updated last month
• schultzelab / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆21Updated 6 years ago
• BioinformaticsFMRP / TCGAWorkflow
  TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages
  ☆44Updated last year
• praneet1988 / CSBB-Shiny
  Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…
  ☆36Updated 2 years ago
• bigbioinformatics / r-programming-and-rnaseq-workshop
  ☆26Updated 4 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆35Updated last year
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated last year
• crazyhottommy / scATACutils
  R/Bioconductor package for working with 10x scATACseq data
  ☆39Updated last year
• nf-core / scflow
  Please consider using/contributing to https://github.com/nf-core/scdownstream
  ☆25Updated 10 months ago
• friedue / Notes
  Personal notes about work- and coding-related topics
  ☆20Updated 2 years ago
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆76Updated last year
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆19Updated last year
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆29Updated 8 months ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆56Updated 3 months ago
• hbctraining / publication_perfect
  Six hour hands-on to creating publication-quality plots in R
  ☆35Updated last year
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆22Updated 2 months ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆75Updated 5 years ago
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated 2 years ago
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆37Updated 5 years ago