NCTraCSIDSci / n3c-longcovid
Scripts used to produce the analysis in our paper on computable phenotypes for long-COVID
☆17Updated 3 months ago
Alternatives and similar repositories for n3c-longcovid:
Users that are interested in n3c-longcovid are comparing it to the libraries listed below
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆48Updated 9 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- HDR UK National Phenotype Library☆21Updated last year
- MASI Lab Implementation of PheWAS in Python☆28Updated 4 months ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- ETL UK-Biobank☆13Updated 2 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆65Updated 8 months ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆86Updated last year
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆23Updated 2 years ago
- An R package for performing various cohort diagnostics.☆43Updated this week
- AutoScore: An Interpretable Machine Learning-Based Automatic Clinical Score Generator☆32Updated 3 weeks ago
- HDR UK Gateway Datasets☆26Updated 2 weeks ago
- ☆28Updated 3 weeks ago
- Prepare UK Biobank Electronic Health Record data for research☆25Updated 2 years ago
- Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU☆16Updated 4 years ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆191Updated this week
- https://celehs.github.io/PheCAP/☆21Updated 3 years ago
- Generate safety signal statistics from FDA FAERS data☆49Updated 9 months ago
- R package to streamline use of the AllofUs researcher workbench☆16Updated 4 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆43Updated 5 months ago
- The PheWAS R package☆139Updated last month
- ☆15Updated last year
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆50Updated last year
- Python package for machine learning for healthcare using a OMOP common data model☆107Updated last year
- Python implementation of POPDx - Predictions for unseen, rare, and common labels.☆9Updated 9 months ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆28Updated 3 years ago
- Oncology Working Group Repository☆56Updated this week
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆99Updated 11 months ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆34Updated 2 years ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated last week