OHDSI / FeatureExtractionLinks
An R package for generating features (covariates) for a cohort using data in the Common Data Model.
☆71Updated last week
Alternatives and similar repositories for FeatureExtraction
Users that are interested in FeatureExtraction are comparing it to the libraries listed below
Sorting:
- An R package for performing various cohort diagnostics.☆48Updated this week
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆89Updated last week
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆33Updated 8 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆145Updated 2 months ago
- Repository of OHDSI Collaborative Research Protocols☆40Updated 2 years ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆212Updated this week
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Updated last year
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆85Updated 3 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 8 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆50Updated 3 months ago
- The Book of OHDSI repository☆121Updated last year
- An R package for evaluating phenotype algorithms.☆21Updated 2 months ago
- ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…☆55Updated 3 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆88Updated last month
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆51Updated last year
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29Updated 4 years ago
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆27Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 5 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆72Updated 5 months ago
- An R package for connecting to databases using JDBC.☆57Updated last week
- ☆31Updated 7 years ago
- A tool to help improve data quality standards in observational data science.☆171Updated last week
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated 11 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆103Updated 3 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆101Updated last year
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆65Updated 6 months ago
- R package to easily interface with OMOP-formatted EHR data.☆37Updated 5 years ago
- Training materials for Vocabulary & CDM Tutorial.☆22Updated 6 years ago
- Oncology Working Group Repository☆59Updated last month
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Updated 6 years ago