ltscomputingllc / faersdbstats
Generate safety signal statistics from FDA FAERS data
☆43Updated 3 months ago
Related projects: ⓘ
- a module to calculate the MeSH similarity☆22Updated 2 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆62Updated last month
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆46Updated 2 months ago
- ☆51Updated 4 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆83Updated 11 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆60Updated 8 months ago
- Retrieve and process PubTator annotations☆43Updated last year
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆28Updated last year
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆26Updated 3 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆60Updated 3 months ago
- https://celehs.github.io/PheCAP/☆20Updated 3 years ago
- A Standard Database for Drug Repositioning☆17Updated 7 years ago
- Public release of the DeepPhe analytic software☆30Updated last year
- CoCoScore: context-aware co-occurrence scores for text mining applications☆18Updated 5 years ago
- An R package for evaluating phenotype algorithms.☆17Updated 2 weeks ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆23Updated 2 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆56Updated 6 years ago
- PhenoTagger☆53Updated 7 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆54Updated 11 months ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆42Updated last month
- DrugBank dataset files in R dataframes☆12Updated 5 months ago
- ☆23Updated 6 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated 8 months ago
- ☆52Updated 2 years ago
- Oncology Working Group Repository☆56Updated 2 months ago
- ☆41Updated 4 years ago
- ☆20Updated last year
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆94Updated 4 months ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆160Updated 4 months ago
- The Clinical Trials Knowledge Graph☆48Updated last year