Alternatives and similar repositories for imodmodel

Users that are interested in imodmodel are comparing it to the libraries listed below

• KosinskiLab / colabseg
  Jupyter-based tool for membrane segmentation manipulation
  ☆9Updated last year
• tomotools / tomotools
  Scripts to make cryo-electron tomography a bit easier
  ☆13Updated last month
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆13Updated 4 months ago
• joton / reliontomotools
  Complementary tools for Relion tomo
  ☆10Updated last year
• builab / subtomo2Chimera
  ☆19Updated 4 months ago
• bforsbe / OccuPy
  ☆17Updated 11 months ago
• bionanopatterning / Ais
  ☆17Updated 3 weeks ago
• alisterburt / autoalign_dynamo
  automated on-the-fly tilt-series alignment
  ☆10Updated 3 years ago
• alisterburt / dynamo2emClarity
  A tool for conversion between subtomogram averaging softwares Dynamo and emClarity
  ☆9Updated 5 years ago
• carsonpurnell / cryotomosim_CTS
  cryo-EM tomogram simulator
  ☆26Updated this week
• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆18Updated last month
• CellArchLab / cryoet-scripts
  Miscellaneous scripts for processing cryo-ET data
  ☆16Updated 4 months ago
• rkms86 / SUSAN
  ☆10Updated 2 weeks ago
• brisvag / stemia
  Scripts and Tools for Electron Microscopy Image Analysis.
  ☆11Updated 8 months ago
• MPI-Dortmund / cryolo
  cryolo documentation
  ☆10Updated last year
• cryo-et-standards / cryoet-geometry
  A possible schema for cryoET geometry metadata
  ☆10Updated 5 months ago
• maxewilkinson / CryoEM-scripts
  Badly written scripts for making cryoEM easier
  ☆13Updated 4 years ago
• KudryashevLab / TomoBEAR
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆27Updated 2 months ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆24Updated 3 months ago
• czimaginginstitute / AreTomo3
  Live processing and real time reconstruction of cryo
  ☆28Updated last month
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated last month
• brisvag / blik
  Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
  ☆26Updated last month
• dtegunov / warp
  ☆16Updated 8 years ago
• dtegunov / membranorama
  A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.
  ☆15Updated 2 years ago
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆19Updated 9 months ago
• bionanopatterning / scNodes
  ☆14Updated 4 months ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆28Updated 5 months ago
• thomasfrosio / emClarity-tutorial
  ☆12Updated 2 years ago
• juglab / cryoCARE_pip
  PIP package of cryoCARE
  ☆34Updated last year
• ZauggGroup / DeePiCt
  Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…
  ☆36Updated last year