MDverse web scrapper 🔎🔧📄
☆15Feb 21, 2026Updated 8 months ago
Alternatives and similar repositories for mdws
Users that are interested in mdws are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python module to plot secondary structure schemes☆26Mar 18, 2026Updated 7 months ago
- Collective variables by artificial neural networks☆11Mar 16, 2022Updated 4 years ago
- ☆23Dec 11, 2024Updated last year
- ☆15Jun 11, 2024Updated 2 years ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆19Apr 16, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆10Nov 22, 2022Updated 3 years ago
- ☆34May 31, 2023Updated 3 years ago
- pKa estimates for proteins using an ensemble approach☆31Jul 24, 2026Updated 3 months ago
- Contains Jupyter notebooks and other materials prepared for the course Numerical Methods offered at TIFR Hyderabad (https://moldis-group.…☆13Dec 26, 2022Updated 3 years ago
- Python rich client for visual protein Sequence to Structure Analysis☆22Mar 31, 2026Updated 6 months ago
- Main repository for METAGUI3☆22Jun 19, 2021Updated 5 years ago
- ASGARD is a tool that allows via an automated MD workflow to perform MD protein or protein-ligand complex analysis and to generate the co…☆20Jul 11, 2024Updated 2 years ago
- Assorted Python Scripts to accompany the gmx analysis tools☆12Jul 16, 2019Updated 7 years ago
- development repository for PyInteraph2☆23Jun 18, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Oct 9, 2024Updated 2 years ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 6 years ago
- Robust and stable clustering of molecular dynamics simulation trajectories.☆20Sep 2, 2022Updated 4 years ago
- ☆32Jul 8, 2026Updated 3 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- ☆17Oct 30, 2023Updated 3 years ago
- We provide a set of scripts to calculate native contacts from a MD. Native contacts are determined according to the overlap and rCSU appr…☆16Jul 2, 2024Updated 2 years ago
- Dynamics PyMOL Plugin☆49Apr 19, 2024Updated 2 years ago
- ☆32Oct 19, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protein interaction calculator☆16Feb 11, 2025Updated last year
- Analysis framework of dissipation-corrected targeted molecular dynamics (dcTMD) simulations.☆17Oct 20, 2026Updated last week
- Cyclic peptide binder design using a fragment docking and assembling strategy☆12May 20, 2025Updated last year
- D. E. Shaw Research Technical Reports☆15Jul 4, 2022Updated 4 years ago
- Implementation of the Paper "iScore: A ML-Based Scoring Function for de novo Drug Discovery" by S.J. Mahdizadeh, and L.A. Eriksson.☆19Jun 26, 2026Updated 4 months ago
- KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.☆35Aug 8, 2026Updated 2 months ago
- Correlation-based feature selection of Molecular Dynamics simulations☆29Aug 18, 2026Updated 2 months ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Oct 2, 2024Updated 2 years ago
- model builder for molecular dynamics simulations☆16Feb 16, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆17Oct 23, 2026Updated last week
- App for serotonergic targets☆12Jan 8, 2026Updated 9 months ago
- Neural relational inference for molecular dynamics simulations☆60May 30, 2023Updated 3 years ago
- Automated bonded parameters for Martini 3☆28Jul 20, 2025Updated last year
- Visual Interactive Analysis of Molecular Dynamics☆339Updated this week
- [Neurips 2025] Official Implementation of ConfRover models☆32Feb 3, 2026Updated 8 months ago