MDverse web scrapper ππ§π
β15Feb 21, 2026Updated last week
Alternatives and similar repositories for mdws
Users that are interested in mdws are comparing it to the libraries listed below
Sorting:
- A python module to plot secondary structure schemesβ25Updated this week
- Python rich client for visual protein Sequence to Structure Analysisβ18Updated this week
- ASGARD is a tool that allows via an automated MD workflow to perform MD protein or protein-ligand complex analysis and to generate the coβ¦β18Jul 11, 2024Updated last year
- development repository for PyInteraph2β22Mar 26, 2025Updated 11 months ago
- App for serotonergic targetsβ12Jan 8, 2026Updated last month
- β21Dec 11, 2024Updated last year
- β29May 31, 2023Updated 2 years ago
- β31Jan 26, 2026Updated last month
- Protein interaction calculatorβ13Feb 11, 2025Updated last year
- A distance distribution-based visualization method for atomic pair energy and precise prediction of absolute binding free energy.β15Feb 4, 2025Updated last year
- Clustering tool for biomolecular structural ensembles and data in general.β10Aug 24, 2020Updated 5 years ago
- Collection of scripts that integrates docking, virtual screening, similarity and molecular modeling programs.β30Dec 16, 2025Updated 2 months ago
- a VMD plugin for binding affinity prediction using end-point free energy methodsβ28Apr 23, 2016Updated 9 years ago
- Correlation-based feature selection of Molecular Dynamics simulationsβ29Nov 25, 2025Updated 3 months ago
- Multi-Level DBSCAN: A Hierarchical Density-Based Clustering Method for Analyzing Molecular Dynamics Trajectoriesβ13Dec 6, 2020Updated 5 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequencesβ¦β19Feb 23, 2026Updated last week
- neuropeptide predictionβ13Sep 2, 2022Updated 3 years ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFEβ16Apr 16, 2025Updated 10 months ago
- A repository of the analysis and simulation tools for biomolecular modeling, simulations and drug discoveryβ13Mar 7, 2025Updated 11 months ago
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarityβ14Dec 7, 2021Updated 4 years ago
- Analysis framework of dissipation-corrected targeted molecular dynamics (dcTMD) simulations.β16Updated this week
- model builder for molecular dynamics simulationsβ16Feb 16, 2023Updated 3 years ago
- Computationally Restoring the Potency of a Clinical Antibodyβ19Mar 1, 2024Updated 2 years ago
- Python3 implementation of Statistical Coupling Analysis (SCA)β18Jan 12, 2026Updated last month
- Fast, parallelized implementation of Principal Component Analysis with constant memory consumption for large data sets.β11Feb 18, 2022Updated 4 years ago
- GUIDEMOL: a Python graphical user interface for molecular descriptors based on RDKitβ14Jan 25, 2024Updated 2 years ago
- Printing text using protein structuresβ14Aug 9, 2021Updated 4 years ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheresβ16Oct 2, 2024Updated last year
- Some GROMACS tutorials using methane and waterβ15Dec 7, 2016Updated 9 years ago
- We provide a set of scripts to calculate native contacts from a MD. Native contacts are determined according to the overlap and rCSU apprβ¦β16Jul 2, 2024Updated last year
- Neural relational inference for molecular dynamics simulationsβ59May 30, 2023Updated 2 years ago
- β19Jan 18, 2026Updated last month
- β16Nov 19, 2023Updated 2 years ago
- β18Nov 10, 2021Updated 4 years ago
- β17Mar 11, 2023Updated 2 years ago
- pyCHARMM tutorial, documentation and examples. This repository contains materials originally from the pyCHARMM Workshop run at the Univerβ¦β74Jan 30, 2026Updated last month
- Robust and stable clustering of molecular dynamics simulation trajectories.β19Sep 2, 2022Updated 3 years ago
- Implementation of the Paper "iScore: A ML-Based Scoring Function for de novo Drug Discovery" by S.J. Mahdizadeh, and L.A. Eriksson (httpsβ¦β17Jun 14, 2024Updated last year
- AI/ML Based QSAR Modeling and Translation to Deployable QSAR WebAppsβ21Oct 26, 2025Updated 4 months ago