TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
☆135Aug 19, 2024Updated last year
Alternatives and similar repositories for TrajectoryNet
Users that are interested in TrajectoryNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆42Jun 16, 2026Updated last month
- ☆23Feb 4, 2025Updated last year
- ☆59Mar 23, 2025Updated last year
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆56Jan 20, 2025Updated last year
- Global Waddington-OT☆23Mar 25, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Sep 24, 2018Updated 7 years ago
- ☆32May 30, 2024Updated 2 years ago
- A software package for analyzing snapshots of developmental processes☆165Sep 15, 2022Updated 3 years ago
- ☆11Dec 8, 2023Updated 2 years ago
- DynGFN: Bayesian Dynamic Causal Discovery using Generative Flow Networks☆61Sep 17, 2025Updated 10 months ago
- Regulatory Temporal Interaction Network Inference☆17Mar 11, 2026Updated 4 months ago
- ☆27Mar 31, 2026Updated 3 months ago
- Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings☆38Nov 29, 2024Updated last year
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆176Oct 31, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆14Jul 28, 2023Updated 2 years ago
- ☆18Mar 31, 2026Updated 3 months ago
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆14Sep 18, 2025Updated 10 months ago
- Implementation of Action Matching for the Schrödinger equation☆25Jun 18, 2023Updated 3 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆81Jan 25, 2024Updated 2 years ago
- ☆14Dec 6, 2021Updated 4 years ago
- Official implementation of Metric Flow Matching (NeurIPS 2024)☆61Aug 14, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scalable framework for comparing metric measure spaces with up to 1M points.☆16Apr 6, 2021Updated 5 years ago
- Optimal transport and generalizations☆68May 13, 2019Updated 7 years ago
- Likelihood Training of Schrödinger Bridge using FBSDEs Theory, ICLR 2022☆93Feb 22, 2022Updated 4 years ago
- Euclidean Wasserstein-2 optimal transportation☆48Aug 19, 2023Updated 2 years ago
- Python3 implementation of the paper [Large-scale optimal transport map estimation using projection pursuit]☆15Feb 24, 2021Updated 5 years ago
- Quantifying experimental perturbations at single cell resolution☆115Sep 27, 2024Updated last year
- ☆25Aug 15, 2023Updated 2 years ago
- Modeling Latent Flow Structure using Hodge Decomposition☆17Mar 13, 2025Updated last year
- PyTorch implementation of the OT-Flow approach in arXiv:2006.00104☆59Jul 25, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆12Jun 13, 2023Updated 3 years ago
- Multi-omic single-cell optimal transport tools☆215Updated this week
- Spatial reconstruction of dissociated single-cell data☆20Jan 12, 2024Updated 2 years ago
- Dynamic inference from single-cell snapshots by optimal transport☆21Mar 14, 2024Updated 2 years ago
- ☆12Apr 13, 2020Updated 6 years ago
- Reconstructing spatiotemporal dynamics from spatial transcriptome snapshots☆64Apr 12, 2026Updated 3 months ago
- A novel method for single-cell diagonal integration: scConfluence☆28Nov 3, 2025Updated 8 months ago