Alternatives and similar repositories for hoc2swc

Users that are interested in hoc2swc are comparing it to the libraries listed below

• JustasB / BlenderNEURON
  Exports 3D structure and activity from NEURON simulator to Blender
  ☆29Updated 7 months ago
• flatironinstitute / kachery-cloud
  ☆21Updated 7 months ago
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆24Updated 7 months ago
• brian-team / brian2modelfitting
  Model fitting toolbox for the Brian 2 simulator
  ☆15Updated last year
• AllenInstitute / sonata
  Collaboration between BBP and AIBS
  ☆58Updated 10 months ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆144Updated this week
• neuroelectro / neuroelectro_org
  The NeuroElectro Project: Compiling information on neuron electrophysiology through literature text-mining.
  ☆17Updated 5 months ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• ProjectPyRhO / PyRhO
  A virtual optogenetics laboratory
  ☆37Updated last year
• NeurodataWithoutBorders / api-python
  [DEPRECATED] Python API for NWB < 2.0
  ☆30Updated 7 years ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆59Updated this week
• kwikteam / klusta
  Automatic spike sorting up to 64 channels
  ☆53Updated 4 years ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆102Updated 5 months ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 2 months ago
• tridesclous / tridesclous
  offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.
  ☆54Updated last year
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆51Updated last year
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆57Updated 2 weeks ago
• AllenInstitute / biophys_optimize
  Optimization of single-cell biophysically detailed models
  ☆15Updated 4 years ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆25Updated last week
• LFPy / LFPy
  Python-module for calculation of extracellular potentials from multicompartment neuron models and networks
  ☆79Updated 4 months ago
• BlueBrain / eFEL
  Electrophys Feature Extraction Library
  ☆71Updated 3 months ago
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆49Updated 3 months ago
• INM-6 / networkunit
  A SciUnit library for validation testing of spiking neural network models.
  ☆16Updated 10 months ago
• BlueBrain / TMD
  A python package for the topological analysis of neurons.
  ☆28Updated 3 months ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆124Updated 4 months ago
• JaneliaSciComp / JRCLUST
  JRCLUST
  ☆35Updated last year
• MouseLand / rastermap
  a visualization method for neural data
  ☆225Updated 2 months ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year