Alternatives and similar repositories for ophys_etl_pipelines

Users that are interested in ophys_etl_pipelines are comparing it to the libraries listed below

• AllenInstitute / All-active-Workflow
  Creating the code base for All-active Model generation written on top of Bluepyopt
  ☆17Updated 5 years ago
• NeurodataWithoutBorders / nwbinspector
  Tool to help inspect NWB files for compliance with NWB Best Practices
  ☆21Updated this week
• AllenInstitute / dipde
  Numerical solver for coupled population density equations
  ☆25Updated 2 years ago
• NeuralEnsemble / neurotune
  Package for fitting/optimization of NeuroML models
  ☆18Updated 9 months ago
• MetaCell / NetPyNE-UI
  NetPyNE User interface
  ☆23Updated last month
• AllenInstitute / sonata
  Collaboration between BBP and AIBS
  ☆59Updated last month
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆39Updated 2 years ago
• neoanalysis / NeoAnalysis
  ☆25Updated 4 years ago
• mne-tools / mne-hcp
  MNE-HCP for processing the Human Connectome Project MEG data using MNE-Python
  ☆26Updated last year
• BlueBrain / eFEL
  Electrophys Feature Extraction Library
  ☆76Updated 10 months ago
• BlueBrain / BluePyEfe
  BluePyEfe: Blue Brain Python E-feature extraction
  ☆17Updated 10 months ago
• SpikeInterface / spikesorters
  Python-based module with spike sorter wrappers and a simple API for running them.
  ☆20Updated 4 years ago
• NeuralEnsemble / neuroConstruct
  neuroConstruct: biophysically detailed neuronal modelling in 3D
  ☆52Updated last month
• bids-apps / giga_connectome
  generate connectome from fMRIPrep outputs
  ☆12Updated last week
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 7 years ago
• voytekresearch / OscillatoryOrganoids
  Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2019.
  ☆16Updated 5 years ago
• auto-pi-lot / autopilot
  Distributed behavioral experiments
  ☆95Updated 10 months ago
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆74Updated 6 months ago
• NathanKlineInstitute / Macaque_auditory_thalamocortical_model_data
  ☆11Updated 2 years ago
• catalystneuro / nwb-conversion-tools
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆25Updated 3 years ago
• flatironinstitute / kachery-cloud
  ☆23Updated last year
• BlueBrain / Long-range-micro-connectome
  BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome
  ☆10Updated 3 years ago
• jbakermans / ManifoldTutorial
  Matlab exercises with solutions to implement and visualise concepts from Sara Solla's talk on World Wide Neuro (Apr 29, 2020)
  ☆20Updated 4 years ago
• NeurodataWithoutBorders / nwb_tutorial
  Tutorials for learning NWB
  ☆17Updated 3 years ago
• braph-software / BRAPH
  Brain Analysis using Graph Theory
  ☆12Updated 6 years ago
• JorritMontijn / UniversalProbeFinder
  A multi-species, multi-ephys format histology processing and probe alignment pipeline
  ☆13Updated last year
• anne-urai / largescale_recordings
  Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…
  ☆18Updated 3 years ago
• espenhgn / ViSAPy
  Python package for generating benchmark data for evaluating spike sorting methods
  ☆21Updated 5 years ago
• calebweinreb / SNUB
  ☆28Updated 2 months ago
• rdgao / field-echos
  Project code for extracting neural population timescale from field potential data (LFP, ECoG, etc)
  ☆19Updated 4 years ago