AllenInstitute / ophys_etl_pipelinesView external linksLinks
Pipelines and modules for processing optical physiology data
☆11Dec 20, 2024Updated last year
Alternatives and similar repositories for ophys_etl_pipelines
Users that are interested in ophys_etl_pipelines are comparing it to the libraries listed below
Sorting:
- That’s what I do: I drink and I know things.☆13Sep 24, 2019Updated 6 years ago
- q-space: multishell sampling and continuous reconstruction of diffusion signal☆20Jan 23, 2026Updated 3 weeks ago
- Tool to help inspect NWB files for compliance with NWB Best Practices☆21Updated this week
- Main repo for the Boss API☆19Nov 21, 2024Updated last year
- Creating the code base for All-active Model generation written on top of Bluepyopt☆17Dec 1, 2020Updated 5 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆29Jan 23, 2026Updated 3 weeks ago
- Python package for analyzing behavioral data for Brain Observatory: Visual Behavior☆25Jan 8, 2025Updated last year
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17May 22, 2024Updated last year
- Numerical solver for coupled population density equations☆25Jul 6, 2023Updated 2 years ago
- This project aims at designing an easy self-made ultrasound imaging device. It mainly consists of "Phased-array transducer", "Pulse-contr…☆14Jun 28, 2023Updated 2 years ago
- Copenhagen brain entropy toolbox - a set of matlab tools to compute entropy measures in neuroimaging data☆10Jan 7, 2025Updated last year
- manuscript latex templates for authors☆10Apr 23, 2025Updated 9 months ago
- Build-A-Cell protocol for making liposomes☆13Jan 30, 2024Updated 2 years ago
- Repository for "The Landscape of Causal Discovery Data: Grounding Causal Discovery in Real-World Applications"☆11May 30, 2025Updated 8 months ago
- The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…☆11Jan 22, 2026Updated 3 weeks ago
- Neural Signal Analysis☆14Jan 5, 2026Updated last month
- Open source software for multi-modal optical molecular imaging☆11May 19, 2022Updated 3 years ago
- Brain Connectivity Laboratory Webpage☆13Dec 4, 2024Updated last year
- IaC codebase for the NeuroCAAS Platform☆39Dec 15, 2023Updated 2 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Mar 4, 2024Updated last year
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Nov 8, 2019Updated 6 years ago
- Package for parsing the contents of Gamry EXPLAIN data (DTA) files☆10Feb 29, 2024Updated last year
- This repo contains the code for the paper "Data-driven discovery of multiscale chemical reactions governed by the law of mass action"☆10Mar 2, 2022Updated 3 years ago
- This toolbox allows to simulate interactions between neural mass potentials (resonating at 40Hz) in the structural connectome. Here, a si…☆11Mar 31, 2022Updated 3 years ago
- Sync-DRAW: Automatic Video Generation using Deep Recurrent Attentive Architectures☆12Oct 21, 2017Updated 8 years ago
- ☆11Nov 2, 2023Updated 2 years ago
- Official code for AL-PINNS: Augmented Lagrangian relaxation method for Physics-Informed Neural Networks☆12Jul 29, 2023Updated 2 years ago
- [NeurIPS 2025] Official code for "Tropical Attention: Neural Algorithmic Reasoning for Combinatorial Algorithms"☆23Oct 23, 2025Updated 3 months ago
- High-level spiking model definition and workflow framework☆19Nov 24, 2025Updated 2 months ago
- A friendly, hands-on introductory course☆22Dec 4, 2025Updated 2 months ago
- jQuery crossword plugin☆10Oct 2, 2015Updated 10 years ago
- Optical flow library, based on NumPy arrays☆11Nov 30, 2021Updated 4 years ago
- ☆13Aug 24, 2020Updated 5 years ago
- A collection of algorithms to reverse using partial information various hashes used by Minecraft to seed its ChunkRandom PRNG.☆10Mar 7, 2024Updated last year
- ☆10Jan 24, 2021Updated 5 years ago
- Model Behavior Study Group☆19Jan 30, 2026Updated 2 weeks ago
- ☆10Jan 23, 2018Updated 8 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆45Updated this week
- code for reading and processing Allen Institute for Brain Science data☆375Jan 7, 2024Updated 2 years ago