AllenInstitute / ophys_etl_pipelinesLinks
Pipelines and modules for processing optical physiology data
☆11Updated 8 months ago
Alternatives and similar repositories for ophys_etl_pipelines
Users that are interested in ophys_etl_pipelines are comparing it to the libraries listed below
Sorting:
- Creating the code base for All-active Model generation written on top of Bluepyopt☆17Updated 4 years ago
- Tool to help inspect NWB files for compliance with NWB Best Practices☆20Updated last week
- Tutorials for learning NWB☆17Updated 2 years ago
- Matlab exercises with solutions to implement and visualise concepts from Sara Solla's talk on World Wide Neuro (Apr 29, 2020)☆20Updated 4 years ago
- Collaboration between BBP and AIBS☆57Updated last year
- Numerical solver for coupled population density equations☆24Updated 2 years ago
- Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2019.☆15Updated 5 years ago
- Distributed behavioral experiments☆95Updated 6 months ago
- neuroConstruct: biophysically detailed neuronal modelling in 3D☆52Updated 6 months ago
- A multi-species, multi-ephys format histology processing and probe alignment pipeline☆13Updated last year
- Python-based module with spike sorter wrappers and a simple API for running them.☆20Updated 4 years ago
- Brain Analysis using Graph Theory☆12Updated 6 years ago
- ☆22Updated 10 months ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆25Updated 2 years ago
- ☆25Updated 4 years ago
- Repository for collecting materials from nwb hackathons☆24Updated 4 months ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆71Updated 2 months ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Python-implementation of the inverse current source density (iCSD) methods from http://software.incf.org/software/csdplotter☆12Updated 4 months ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆28Updated last year
- A modular package to control stimulation and track behaviour☆46Updated 10 months ago
- Keras network for spike detection from calcium traces☆12Updated 5 years ago
- Python package for generating benchmark data for evaluating spike sorting methods☆21Updated 4 years ago
- IBL core shared libraries☆63Updated this week
- ☆28Updated last year
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Project code for extracting neural population timescale from field potential data (LFP, ECoG, etc)☆19Updated 4 years ago
- Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction …☆49Updated last year