A python script for generating "alluvial" styled bipartite diagrams, using matplotlib and numpy
☆56Dec 16, 2022Updated 3 years ago
Alternatives and similar repositories for alluvial_diagram
Users that are interested in alluvial_diagram are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- Scripts for using scanpy☆40Oct 20, 2025Updated 8 months ago
- Continuum Dynamics Evaluation and Test Suite☆15Aug 29, 2017Updated 8 years ago
- ☆12Jan 14, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Find hot data sets in your area (of research)!☆16Dec 20, 2018Updated 7 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- A pipeline to transform images into valuable analysis items☆19Jun 19, 2026Updated 2 weeks ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- Transcription Factor Co-Occurrence using Market Basket analysis☆17Jul 7, 2025Updated 11 months ago
- VariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations☆31May 3, 2026Updated 2 months ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆20Jun 8, 2026Updated 3 weeks ago
- Template for building a small workflow in Nextflow☆17May 2, 2022Updated 4 years ago
- ☆15Sep 20, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GPU Based 3D Finite Volume Fluid code written in Julia☆11Jan 16, 2024Updated 2 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- GitHub template repository for creating new barebones Nextflow pipelines, using the Arcadia-Science/nextflow-template cookiecutter templa…☆13Mar 21, 2023Updated 3 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆12May 12, 2025Updated last year
- Calling disease-related genes☆17Apr 1, 2026Updated 3 months ago
- Prion-Like Amino Acid Composition☆18Dec 15, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- epiTCR: a highly sensitive predictor for TCR–peptide binding☆16Aug 15, 2025Updated 10 months ago
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Feb 14, 2022Updated 4 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated last year
- Heritability Estimation with high Efficiency using LD and Summary Statistics☆14Feb 14, 2024Updated 2 years ago
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 3 years ago
- ☆22Jun 14, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Implementation of the AIControl paper in Julia 1.0☆17Mar 4, 2019Updated 7 years ago
- ☆14Jun 26, 2025Updated last year
- ☆17Jan 6, 2025Updated last year
- Finite volume based solver for Advection-Diffusion Equation solver using only Python☆12Feb 24, 2021Updated 5 years ago
- scITDG is a tool for identifying time-dependent genes in single-cell sequencing data☆16Nov 24, 2025Updated 7 months ago
- SMR-Portal: an online platform for integrative analysis of GWAS and xQTL data to identify complex trait genes.☆23Dec 2, 2025Updated 7 months ago
- Lightweight and fast Arduino and Teensyduino library for controlling a stepper motor driver with a STEP/DIR interface☆12Sep 6, 2020Updated 5 years ago