vinsburg / alluvial_diagramView external linksLinks
A python script for generating "alluvial" styled bipartite diagrams, using matplotlib and numpy
☆56Dec 16, 2022Updated 3 years ago
Alternatives and similar repositories for alluvial_diagram
Users that are interested in alluvial_diagram are comparing it to the libraries listed below
Sorting:
- Clear My Record is a project to assist people the process of expunging their criminal convictions.☆10Nov 5, 2018Updated 7 years ago
- This version of Chombo is fortran-free and depends on the Proto middleware infrastructure for performance portability.☆10Sep 12, 2025Updated 5 months ago
- Scripts for using scanpy☆39Oct 20, 2025Updated 3 months ago
- A Nextflow workflow for HLA typing using HLA-HD☆14Jul 3, 2024Updated last year
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆10May 12, 2025Updated 9 months ago
- An easy-to-use and interactive web application for FragPipe☆14Jul 28, 2025Updated 6 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Feb 14, 2022Updated 4 years ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆41Jan 31, 2024Updated 2 years ago
- Tutorials for working with ADCIRC data and the CERA visualization software☆10May 15, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- Tools for processing HIC data.☆11May 21, 2021Updated 4 years ago
- GPU Based 3D Finite Volume Fluid code written in Julia☆11Jan 16, 2024Updated 2 years ago
- 1D Roe Riemann Solver☆10Jun 20, 2016Updated 9 years ago
- Continuum Dynamics Evaluation and Test Suite☆15Aug 29, 2017Updated 8 years ago
- Generate Click options from msgspec types☆11Feb 1, 2025Updated last year
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 4 years ago
- Estimate the cis-regulatory activity of transposable element (TEs) subfamilies☆10Dec 15, 2023Updated 2 years ago
- An efficient tool for large-scale correlation network analysis☆14Dec 27, 2024Updated last year
- Transcription Factor Co-Occurrence using Market Basket analysis☆16Jul 7, 2025Updated 7 months ago
- MiniApp illustrating the implementation of a compressible hydrodynamics solver on top of the performance portable adaptive mesh refinemen…☆10Jun 20, 2025Updated 7 months ago
- 🦋 Small scripts and tools to do data stuff with the AT Protocol.☆13Nov 28, 2024Updated last year
- Tool comparison for detecting differentially expressed individual transposable elements☆11Jan 7, 2022Updated 4 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- Estimate PTM hotspots in protein sequence alignments☆14Feb 6, 2019Updated 7 years ago
- Codes for solving flow problems based on Kinetic Flux Vector Splitting (KFVS) Scheme☆10Jun 1, 2015Updated 10 years ago
- "Scutoids are a geometrical solution to three-dimensional packing of epithelia" - https://www.nature.com/articles/s41467-018-05376-1.☆12Feb 14, 2022Updated 4 years ago
- A centralized repository for network analysis tools.☆11Dec 16, 2019Updated 6 years ago
- Modeling Enhancer-Promoter Interactions with Attention-Based Neural Networks☆10Feb 13, 2018Updated 8 years ago
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆11Nov 15, 2024Updated last year
- ☆12Jan 14, 2023Updated 3 years ago
- Conda recipes for Glotzer Lab software on HPC resources☆12Updated this week
- ☆17Apr 4, 2025Updated 10 months ago
- Solve the 2D shallow water equations with a finite volume method based on a Q-scheme☆14Mar 30, 2023Updated 2 years ago
- e3nn tutorial for Materials Research Society Fall Meeting 2021☆14Nov 29, 2021Updated 4 years ago
- macOS window selector☆13Aug 27, 2024Updated last year
- A spreadsheet implemented in Python, using PyScript☆13Sep 25, 2024Updated last year
- C++ implementation of a MCMC sampler for the (canonical) SBM☆11Oct 21, 2019Updated 6 years ago
- CMake helpers for building Cython modules☆13Feb 2, 2026Updated 2 weeks ago
- An easy to use chrome extension that new developers can use to make their own chrome extensions☆11Aug 4, 2024Updated last year