gregversteeg / bio_corex

Related projects: ⓘ

• gregversteeg / CorEx
  CorEx or "Correlation Explanation" discovers a hierarchy of informative latent factors. This reference implementation has been superseded…
  ☆303Updated 7 years ago
• skggm / skggm
  Scikit-learn compatible estimation of general graphical models
  ☆240Updated 5 months ago
• Hoosier-Clusters / clusim
  An extended package for clustering similarity
  ☆64Updated 3 months ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆42Updated 5 years ago
• fastcluster / fastcluster
  Fast hierarchical clustering routines for R and Python.
  ☆134Updated 2 months ago
• powerscorinne / GLRM
  ☆97Updated 6 years ago
• facebookresearch / PoincareMaps
  The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…
  ☆146Updated 3 years ago
• abidlabs / contrastive
  Contrastive PCA
  ☆196Updated last year
• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 3 years ago
• SheffieldML / GPclust
  Collapsed Variational Bayes
  ☆67Updated 4 years ago
• beringresearch / ivis
  Dimensionality reduction in very large datasets using Siamese Networks
  ☆330Updated 3 months ago
• gokceneraslan / neuralnet_countmodels
  Count models with TensorFlow and Keras
  ☆47Updated 6 years ago
• adri-romsor / DietNetworks
  ☆33Updated 6 years ago
• EpistasisLab / scikit-mdr
  A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
  ☆125Updated last year
• IlyaLab / CombiningDependentPvaluesUsingEBM
  Python, R and Matlab implementation of Brown's Method to combine dependent P-values
  ☆24Updated 6 years ago
• jaak-s / macau
  Bayesian Factorization with Side Information in C++ with Python wrapper
  ☆41Updated 2 years ago
• meeliskull / prg
  Software to create Precision-Recall-Gain curves and calculate area under the curve
  ☆38Updated 2 years ago
• HIPS / pgmult
  Dependent multinomials made easy: stick-breaking with the Pólya-gamma augmentation
  ☆59Updated 3 years ago
• sorgerlab / indra
  INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and datab…
  ☆173Updated last month
• sysbio-vo / bnfinder
  BNFinder - tool for learning bayesian networks
  ☆50Updated 5 years ago
• kylemcdonald / Coloring-t-SNE
  Exploration of methods for coloring t-SNE.
  ☆219Updated 7 years ago
• ucsd-ccbb / visJS2jupyter
  visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells
  ☆78Updated last year
• junpenglao / GLMM-in-Python
  Generalized linear mixed-effect model in Python
  ☆175Updated 6 years ago
• maclandrol / FisherExact
  Fisher exact test for mxn contingency table in python
  ☆37Updated 3 months ago
• ulfaslak / py_pcha
  Python package that implements the PCHA algorithm for Archetypal Analysis by Mørup et. al.
  ☆36Updated 2 years ago
• selective-inference / Python-software
  Python software for selective inference
  ☆51Updated last year
• BenjaminDoran / unidip
  Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise
  ☆36Updated 11 months ago
• NICTA / revrand
  A library of scalable Bayesian generalised linear models with fancy features
  ☆58Updated 7 years ago
• timsainb / ParametricUMAP_paper
  Parametric UMAP embeddings for representation and semisupervised learning. From the paper "Parametric UMAP: learning embeddings with deep…
  ☆149Updated 3 years ago
• MathieuCarriere / sklearn-tda
  Open source library for combining TDA and Machine Learning
  ☆88Updated 11 months ago