Alternatives and similar repositories for bio_corex

Users that are interested in bio_corex are comparing it to the libraries listed below

• gregversteeg / CorEx
  CorEx or "Correlation Explanation" discovers a hierarchy of informative latent factors. This reference implementation has been superseded…
  ☆305Updated 7 years ago
• Hoosier-Clusters / clusim
  An extended package for clustering similarity
  ☆64Updated 3 months ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆41Updated 6 years ago
• ulfaslak / py_pcha
  Python package that implements the PCHA algorithm for Archetypal Analysis by Mørup et. al.
  ☆38Updated 2 years ago
• kylessmith / dynamicTreeCut
  Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
  ☆40Updated 3 years ago
• jaak-s / macau
  Bayesian Factorization with Side Information in C++ with Python wrapper
  ☆41Updated 3 years ago
• meeliskull / prg
  Software to create Precision-Recall-Gain curves and calculate area under the curve
  ☆40Updated 2 years ago
• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 4 years ago
• HIPS / pgmult
  Dependent multinomials made easy: stick-breaking with the Pólya-gamma augmentation
  ☆61Updated 4 years ago
• adri-romsor / DietNetworks
  ☆34Updated 7 years ago
• abidlabs / contrastive
  Contrastive PCA
  ☆213Updated 6 months ago
• powerscorinne / GLRM
  ☆98Updated 7 years ago
• IlyaLab / CombiningDependentPvaluesUsingEBM
  Python, R and Matlab implementation of Brown's Method to combine dependent P-values
  ☆25Updated 7 years ago
• skggm / skggm
  Scikit-learn compatible estimation of general graphical models
  ☆247Updated last year
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• fastcluster / fastcluster
  Fast hierarchical clustering routines for R and Python.
  ☆144Updated this week
• BenjaminDoran / unidip
  Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise
  ☆36Updated last year
• SheffieldML / GPclust
  Collapsed Variational Bayes
  ☆70Updated 5 years ago
• glm-tools / pyglmnet
  Python implementation of elastic-net regularized generalized linear models
  ☆280Updated last year
• EpistasisLab / scikit-mdr
  A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
  ☆125Updated last year
• ericmjl / hiveplot
  Hive Plots in using Python & matplotlib!
  ☆71Updated 6 years ago
• dreamtools / dreamtools
  Code sharing related to DREAM challenges
  ☆23Updated 8 years ago
• slinderman / pypolyagamma
  Fast C code for sampling Polya-gamma random variates. Builds on Jesse Windle's BayesLogit library.
  ☆82Updated 5 years ago
• civisanalytics / python-glmnet
  A python port of the glmnet package for fitting generalized linear models via penalized maximum likelihood.
  ☆266Updated 9 months ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆60Updated 4 years ago
• beringresearch / ivis
  Dimensionality reduction in very large datasets using Siamese Networks
  ☆333Updated 7 months ago
• PrincetonUniversity / DP_GP_cluster
  ☆79Updated last year
• BayesForDays / nontology
  Matrix tools for building and inspecting latent spaces
  ☆27Updated 6 years ago
• NikolayOskolkov / tSNE_vs_UMAP_GlobalStructure
  Here we address the global structure preservation by tSNE and UMAP
  ☆48Updated 5 years ago
• selective-inference / Python-software
  Python software for selective inference
  ☆53Updated 2 years ago