Alternatives and similar repositories for NHP-BrainExtraction:

Users that are interested in NHP-BrainExtraction are comparing it to the libraries listed below

• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆16Updated 11 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆33Updated 5 years ago
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆20Updated last year
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆38Updated 2 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆48Updated 2 weeks ago
• 3Tissue / MRtrix3Tissue
  MRtrix3Tissue adds capabilities for 3-Tissue CSD modelling and analysis to a complete version of MRtrix3.
  ☆13Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 4 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆35Updated last month
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆27Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 5 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 5 months ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆49Updated 2 months ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆25Updated last month
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 5 months ago
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆26Updated 3 years ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆30Updated 10 months ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated 2 weeks ago
• sina-mansour / UKB-connectomics
  This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.
  ☆64Updated last year
• DiedrichsenLab / cerebellar_atlases
  ☆36Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆69Updated 9 months ago
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆31Updated last year
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆18Updated 7 months ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI
  ☆46Updated last week
• neurabenn / precon_all
  precon_all surface pipline
  ☆20Updated last week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 5 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆60Updated 3 months ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆41Updated last week
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆35Updated this week
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆36Updated 3 years ago
• koenhaak / congrads
  Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…
  ☆36Updated 6 years ago