cabeen / qitLinks
A repository for the Quantitative Imaging Toolkit (QIT)
☆25Updated 2 months ago
Alternatives and similar repositories for qit
Users that are interested in qit are comparing it to the libraries listed below
Sorting:
- Preprocessing of diffusion MRI☆177Updated 3 weeks ago
- Preprocessing of arterial spin labeling (ASL) data☆55Updated last week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆73Updated 2 weeks ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆84Updated 6 months ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆32Updated last year
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated 2 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆116Updated 2 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆30Updated 2 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆94Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆73Updated 3 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆49Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated this week
- PET Unified Pipeline☆24Updated 5 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆58Updated this week
- Processing tools for high-resolution neuroimaging☆73Updated last month
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆116Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆77Updated last week
- Automated Fiber Quantification☆77Updated last year
- ☆39Updated 3 years ago
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆34Updated 3 years ago
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆111Updated last week
- Purifibre removes spurious streamlines from tractograms☆10Updated 3 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆124Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆107Updated 2 weeks ago
- Python utilities for medical image and surface-based analysis☆38Updated 3 weeks ago
- Fast brain extraction using neural networks☆50Updated last year
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆42Updated 3 years ago
- BIDS app wrapping recon-all from FreeSurfer☆44Updated last month