MRtrix scripts to generate dense weighted structural connectomes from the Human Connectome Project "minimally pre-processed" diffusion MRI data
☆22Dec 23, 2022Updated 3 years ago
Alternatives and similar repositories for HCP-dMRI-connectome
Users that are interested in HCP-dMRI-connectome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code supporting Bazinet et al., 2023, "Assortative mixing in micro-architecturally annotated brain connectomes" (Nature Communications)☆14May 19, 2023Updated 3 years ago
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆52Apr 29, 2023Updated 3 years ago
- ☆10Apr 3, 2024Updated 2 years ago
- Excitation-inhibition balance brain network fitting☆22Apr 28, 2023Updated 3 years ago
- The Yale Brain Atlas is a high resolution anatomical human brain atlas with localized multimodal data.☆17May 14, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Nov 8, 2019Updated 6 years ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆55Apr 26, 2026Updated 5 months ago
- Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction☆12May 21, 2023Updated 3 years ago
- A package to study complex networks based on the temporal evolution of their Dynamic Communicability and Flow.☆11Jan 30, 2026Updated 8 months ago
- Pure python tools for interfacing with INTEGRAL SPI data. It also provides a 3ML plugin for performing full forward folding spectral anal…☆10Sep 4, 2025Updated last year
- The Bayesian Virtual Epileptic Patient: a probabilistic framework designed to infer the spatial map of epileptogenicity in a personalized…☆37Sep 15, 2025Updated last year
- 「行動データの計算論モデリング」のサポートページです。☆11Mar 1, 2021Updated 5 years ago
- Scripts to use with Open Science materials such as fMRIPrep☆29Jan 13, 2021Updated 5 years ago
- Code for paper in PNAS 2020☆17Nov 17, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Evaluation code used in the brain parcellation survey "Human brain mapping: A systematic comparison of parcellation methods for the human…☆18Nov 20, 2017Updated 8 years ago
- ☆223Jun 23, 2023Updated 3 years ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆136Nov 8, 2022Updated 3 years ago
- ☆18Jun 5, 2021Updated 5 years ago
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆37Jul 22, 2025Updated last year
- Julia package for reconstructing fiber trajectories from multi-scale, multi-modal imaging data☆22Apr 24, 2025Updated last year
- DEPRECATED: Use tvb-root. The Virtual Brain framework. Requires tvb-library☆47Apr 16, 2020Updated 6 years ago
- matplotlib mesh surface plotter☆30Jul 25, 2025Updated last year
- Combined cortical/subcortical atlases for xcp-d and qsiprep☆33Aug 28, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)☆38Apr 4, 2026Updated 6 months ago
- FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution☆28Apr 26, 2022Updated 4 years ago
- ☆24Sep 14, 2026Updated 3 weeks ago
- Gaussian-Processes Surrogate Optimisation in python☆18May 18, 2021Updated 5 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆21Dec 23, 2021Updated 4 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆354Sep 23, 2026Updated 2 weeks ago
- Real-time tractogram computer and visualizer☆16Dec 21, 2022Updated 3 years ago
- Integration between TVB and NEST, for multiscale (co)simulations .☆47Aug 13, 2026Updated last month
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆115Sep 3, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆43Jun 16, 2018Updated 8 years ago
- ☆29Nov 23, 2022Updated 3 years ago
- Processing pipelines for the HCP☆660Updated this week
- TVB-UKBB Pipeline: TheVirtualBrain implementation of the UK Biobank pipeline☆28Sep 10, 2026Updated 3 weeks ago
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆80Jun 8, 2026Updated 4 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆71Aug 14, 2026Updated last month
- Estimating the functional dimensionality of neural representations☆19Mar 19, 2022Updated 4 years ago