MRtrix scripts to generate dense weighted structural connectomes from the Human Connectome Project "minimally pre-processed" diffusion MRI data
☆22Dec 23, 2022Updated 3 years ago
Alternatives and similar repositories for HCP-dMRI-connectome
Users that are interested in HCP-dMRI-connectome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code supporting Bazinet et al., 2023, "Assortative mixing in micro-architecturally annotated brain connectomes" (Nature Communications)☆14May 19, 2023Updated 3 years ago
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆51Apr 29, 2023Updated 3 years ago
- Excitation-inhibition balance brain network fitting☆22Apr 28, 2023Updated 3 years ago
- The Yale Brain Atlas is a high resolution anatomical human brain atlas with localized multimodal data.☆16May 14, 2026Updated 4 months ago
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Nov 8, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆55Apr 26, 2026Updated 4 months ago
- Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction☆12May 21, 2023Updated 3 years ago
- A package to study complex networks based on the temporal evolution of their Dynamic Communicability and Flow.☆11Jan 30, 2026Updated 7 months ago
- The Bayesian Virtual Epileptic Patient: a probabilistic framework designed to infer the spatial map of epileptogenicity in a personalized…☆37Sep 15, 2025Updated last year
- 「行動データの計算論モデリング」のサポートページです。☆11Mar 1, 2021Updated 5 years ago
- Scripts to use with Open Science materials such as fMRIPrep☆29Jan 13, 2021Updated 5 years ago
- Code for paper in PNAS 2020☆17Nov 17, 2023Updated 2 years ago
- Evaluation code used in the brain parcellation survey "Human brain mapping: A systematic comparison of parcellation methods for the human…☆18Nov 20, 2017Updated 8 years ago
- ☆224Jun 23, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆136Nov 8, 2022Updated 3 years ago
- ☆18Jun 5, 2021Updated 5 years ago
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆37Jul 22, 2025Updated last year
- Julia package for reconstructing fiber trajectories from multi-scale, multi-modal imaging data☆22Apr 24, 2025Updated last year
- DEPRECATED: Use tvb-root. The Virtual Brain framework. Requires tvb-library☆47Apr 16, 2020Updated 6 years ago
- matplotlib mesh surface plotter☆30Jul 25, 2025Updated last year
- Combined cortical/subcortical atlases for xcp-d and qsiprep☆33Aug 28, 2024Updated 2 years ago
- Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)☆38Apr 4, 2026Updated 5 months ago
- FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution☆27Apr 26, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆23Updated this week
- Gaussian-Processes Surrogate Optimisation in python☆18May 18, 2021Updated 5 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆21Dec 23, 2021Updated 4 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆354Updated this week
- Real-time tractogram computer and visualizer☆16Dec 21, 2022Updated 3 years ago
- Integration between TVB and NEST, for multiscale (co)simulations .☆47Aug 13, 2026Updated last month
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆115Sep 3, 2024Updated 2 years ago
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆43Jun 16, 2018Updated 8 years ago
- ☆29Nov 23, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Processing pipelines for the HCP☆654Sep 9, 2026Updated last week
- TVB-UKBB Pipeline: TheVirtualBrain implementation of the UK Biobank pipeline☆28Sep 10, 2026Updated last week
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆79Jun 8, 2026Updated 3 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆71Aug 14, 2026Updated last month
- Estimating the functional dimensionality of neural representations☆19Mar 19, 2022Updated 4 years ago
- A volumetric version of the HCP-MMP1 atlas conveniently imported in FSL. Please consider citing "Bedini, M., Olivetti, E., Avesani, P., &…☆30Mar 5, 2025Updated last year
- Tools for creating full TVB models from individual anatomical scans☆35Feb 19, 2021Updated 5 years ago