CovertLab / WholeCell
Mycoplasma genitalium whole-cell model
☆122Updated 9 years ago
Alternatives and similar repositories for WholeCell
Users that are interested in WholeCell are comparing it to the libraries listed below
Sorting:
- An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phen…☆63Updated last year
- Release of the whole cell E. coli model.☆65Updated 5 months ago
- Python framework for Systems Biology modeling☆182Updated 2 months ago
- DCell browser and gene deletion simulator☆123Updated 2 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆106Updated this week
- Computational synthetic biology: Predicting DNA edits for bioengineering☆86Updated 8 years ago
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆60Updated 5 months ago
- Rule-based modeling framework☆63Updated 3 weeks ago
- Transcriptic CLI & Python Client Library☆49Updated last year
- WebLogo 3: Sequence Logos redrawn☆151Updated last week
- DNA plotting library for Python☆295Updated last year
- A Python framework for structural systems biology☆107Updated 4 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆236Updated 4 years ago
- Repository for collective design of an iGEM DNA distribution☆44Updated 2 years ago
- Virtual Cell Framework☆82Updated this week
- cameo - computer aided metabolic engineering & optimization☆115Updated 2 years ago
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆392Updated 11 months ago
- Cello v2 is the continuation of the Cello genetic circuit design software.☆59Updated 3 years ago
- The BiGG Models website server☆81Updated 5 years ago
- Python library for generating Autoprotocol☆122Updated last year
- Whole cell model of E. coli implemented with Vivarium☆17Updated this week
- Boolean Network Modeling☆40Updated 5 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- Python Environment for Modeling and Simulating Biological Systems☆116Updated last month
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆177Updated last month
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆56Updated 9 years ago
- SBOL Designer Project☆32Updated 3 years ago
- Native python implementation of SBOL 3.0 specification☆39Updated last month
- Pipeline for protein folding using PconsC and Rosetta☆18Updated 6 years ago
- ☆12Updated 5 years ago