CovertLab / WholeCellLinks
Mycoplasma genitalium whole-cell model
☆124Updated 10 years ago
Alternatives and similar repositories for WholeCell
Users that are interested in WholeCell are comparing it to the libraries listed below
Sorting:
- Computational synthetic biology: Predicting DNA edits for bioengineering☆89Updated 8 years ago
- Python framework for Systems Biology modeling☆189Updated 4 months ago
- DCell browser and gene deletion simulator☆124Updated 2 years ago
- An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phen…☆63Updated 2 weeks ago
- DNA plotting library for Python☆300Updated last year
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆239Updated 5 years ago
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆63Updated 2 months ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆117Updated this week
- Virtual Cell Framework☆102Updated this week
- Release of the whole cell E. coli model.☆73Updated last year
- Python Environment for Modeling and Simulating Biological Systems☆128Updated last week
- A tool for researchers working in synthetic biology and virology to design robotic wet lab protocols using a visual UI without coding.☆32Updated 7 years ago
- Boolean Network Modeling☆40Updated 5 years ago
- cameo - computer aided metabolic engineering & optimization☆122Updated 3 years ago
- Python library for generating Autoprotocol☆124Updated 2 years ago
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆79Updated last week
- SBOL Designer Project☆31Updated 4 years ago
- Rule-based modeling framework☆65Updated 6 months ago
- Transcriptic CLI & Python Client Library☆49Updated last year
- The BiGG Models website server☆85Updated 6 years ago
- WebLogo 3: Sequence Logos redrawn☆152Updated 7 months ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆58Updated 10 years ago
- Cello v2 is the continuation of the Cello genetic circuit design software.☆65Updated 3 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆263Updated 2 years ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆209Updated last week
- A Python framework for structural systems biology☆110Updated 5 years ago
- Build, share, and embed visualizations of metabolic pathways.☆228Updated last year
- SWIG-Python wrappers implementing SBOL 2.2☆25Updated 3 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago