Mycoplasma genitalium whole-cell model
☆128Oct 6, 2015Updated 10 years ago
Alternatives and similar repositories for WholeCell
Users that are interested in WholeCell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Public source code for AnimatLab neuromechanical simulator system☆15Oct 4, 2016Updated 9 years ago
- A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results☆43Updated this week
- Whole cell model of E. coli implemented with Vivarium☆30Updated this week
- Whole-cell modeling tutorials☆18Jun 26, 2020Updated 6 years ago
- Dynamic Flux Balance analysis in Python☆12Jan 22, 2016Updated 10 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Datasets for open forcefield parameterization and development☆11Sep 22, 2019Updated 6 years ago
- ☆21Nov 13, 2018Updated 7 years ago
- Sample repo for a blog post on testing react components with enzyme☆20Aug 25, 2016Updated 9 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- An open platform for capturing, integrating, storing, and sharing biological knowledge in and across organizations.☆23Jan 28, 2017Updated 9 years ago
- NIF Standard Ontologies (NIFSTD)☆61Jul 1, 2026Updated 2 weeks ago
- ☆18Aug 4, 2018Updated 7 years ago
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- Toolkit for discovering and aggregating data for whole-cell modeling☆15Jan 19, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- OpenWorm main website☆29Apr 16, 2026Updated 3 months ago
- A curated repository designed to serve as a comprehensive guide for researchers interested in the intersection of Transformer models and …☆44Dec 18, 2024Updated last year
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated 2 years ago
- Python interface for running COMETS simulations and analyzing the results☆16May 19, 2026Updated 2 months ago
- Encoding Dynamic Flux Balance Analysis in SBML☆13Sep 16, 2020Updated 5 years ago
- Geppetto Java frontend bundle☆30Jul 14, 2026Updated last week
- MegaSSR is a robust online server that identifies Simple Sequence Repeats (SSR) and enables the design of SSR markers in high-throughput …☆11Nov 25, 2024Updated last year
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 7 years ago
- High-level, high-performance, constraint-based reconstruction and analysis in Julia☆63Apr 26, 2023Updated 3 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 4 months ago
- Release of the whole cell E. coli model.☆76Dec 10, 2024Updated last year
- The physiologically-based whole-body model of the glucose-insulin-glucagon regulatory system☆27Mar 23, 2019Updated 7 years ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆12Feb 20, 2024Updated 2 years ago
- Dimensionality reduction and batch integration methods for single cell data☆17Feb 9, 2023Updated 3 years ago
- A method for identifying deleterious protein variation.☆11Nov 14, 2016Updated 9 years ago
- Python package for creating, calibrating and simulating RBA models☆14Apr 8, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- miredo for android☆11Jan 5, 2014Updated 12 years ago
- Pytorch implementation of Human-Level Control through Deep Reinforcement Learning☆11May 31, 2017Updated 9 years ago
- ☆15Jun 4, 2014Updated 12 years ago
- A study of ecosystem in Julia, as an alternative to Matlab☆11Jul 2, 2020Updated 6 years ago
- SNAP repository for Ringo☆15Jul 25, 2017Updated 8 years ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- A Python MPI Pool☆17Jun 21, 2020Updated 6 years ago