CovertLab / WholeCellLinks
Mycoplasma genitalium whole-cell model
☆124Updated 10 years ago
Alternatives and similar repositories for WholeCell
Users that are interested in WholeCell are comparing it to the libraries listed below
Sorting:
- Computational synthetic biology: Predicting DNA edits for bioengineering☆90Updated 8 years ago
- DCell browser and gene deletion simulator☆124Updated 3 years ago
- Python framework for Systems Biology modeling☆189Updated 6 months ago
- DNA plotting library for Python☆301Updated last year
- An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phen…☆63Updated 2 months ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆239Updated 5 years ago
- Release of the whole cell E. coli model.☆74Updated last year
- Python Environment for Modeling and Simulating Biological Systems☆131Updated 2 months ago
- Python library for generating Autoprotocol☆124Updated 2 years ago
- GPU-accelerated multicellular modelling framework☆71Updated 9 months ago
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆63Updated last month
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆123Updated last week
- Virtual Cell Framework☆110Updated last week
- cameo - computer aided metabolic engineering & optimization☆124Updated 3 years ago
- DNA-Fountain☆160Updated 6 months ago
- Transcriptic CLI & Python Client Library☆49Updated 2 years ago
- Rule-based modeling framework☆65Updated 8 months ago
- The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.☆52Updated 4 years ago
- The BiGG Models website server☆88Updated 6 years ago
- Cello v2 is the continuation of the Cello genetic circuit design software.☆66Updated 3 years ago
- WebLogo 3: Sequence Logos redrawn☆154Updated last week
- A tool for researchers working in synthetic biology and virology to design robotic wet lab protocols using a visual UI without coding.☆32Updated 7 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 7 years ago
- A Python framework for structural systems biology☆110Updated 5 years ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆61Updated 10 years ago
- Deep neural networks for predicting CpG methylation☆152Updated 6 years ago
- PyQt5 version of cadnano☆73Updated 2 years ago
- Build, share, and embed visualizations of metabolic pathways.☆232Updated last year
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆79Updated this week
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆215Updated this week