CompOmics / searchguiLinks
Highly adaptable common interface for proteomics search and de novo engines
☆43Updated 3 weeks ago
Alternatives and similar repositories for searchgui
Users that are interested in searchgui are comparing it to the libraries listed below
Sorting:
- Interpretation of proteomics identification results☆48Updated 2 months ago
- PDV: an integrative proteomics data viewer☆48Updated last month
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆116Updated 2 weeks ago
- Reporting and exchange format for mass spectrometry quality control data☆31Updated 2 weeks ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆96Updated 2 weeks ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆87Updated last month
- Graphical user interface for de novo sequencing of tandem mass spectra☆14Updated last year
- ☆27Updated 4 months ago
- ☆13Updated last year
- MSDK source code repository☆39Updated 2 years ago
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆27Updated last week
- A Python interface to proteomics data repositories☆34Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- Differential Expression Analysis tool box R lang package for omics data☆45Updated last week
- Open source Java library for computational proteomics☆33Updated 5 months ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆45Updated this week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆48Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆49Updated last week
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆25Updated 6 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- ☆55Updated 4 years ago
- A Comet-based, best practices proteomics pipeline.☆37Updated last year
- ☆62Updated last year
- metaX: a flexible and comprehensive software for processing omics data.☆26Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆34Updated last year
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆21Updated this week
- Absolute quantification package based on quantms.io☆14Updated 3 weeks ago
- MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.☆30Updated 4 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 2 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated last month