CompOmics / searchguiLinks
Highly adaptable common interface for proteomics search and de novo engines
☆44Updated last month
Alternatives and similar repositories for searchgui
Users that are interested in searchgui are comparing it to the libraries listed below
Sorting:
- Interpretation of proteomics identification results☆48Updated 2 months ago
- PDV: an integrative proteomics data viewer☆48Updated 2 months ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆117Updated this week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆87Updated 2 months ago
- Reporting and exchange format for mass spectrometry quality control data☆31Updated this week
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆27Updated 2 weeks ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆98Updated last week
- Imputing proteomics data using deep learning models☆22Updated 3 weeks ago
- Open source Java library for computational proteomics☆33Updated 6 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆51Updated 2 weeks ago
- MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.☆30Updated 4 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- Absolute quantification package based on quantms.io☆14Updated last month
- ☆62Updated last year
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆45Updated last week
- Graphical user interface for de novo sequencing of tandem mass spectra☆15Updated last year
- Community-curated tutorials and datasets for ML in proteomics☆54Updated 2 months ago
- De novo peptide sequencing for DDA and DIA by deep learning☆34Updated 4 years ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆25Updated 7 months ago
- python scripts for proteogenomics analysis☆10Updated 5 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆49Updated 2 weeks ago
- MSDK source code repository☆39Updated 2 years ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆65Updated 3 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 4 months ago
- A cross-platform proteomics data analysis suite☆237Updated this week
- A Comet-based, best practices proteomics pipeline.☆37Updated last year
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆119Updated last month
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆53Updated 10 months ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆41Updated last month
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆35Updated 7 months ago