Alternatives and similar repositories for meta-proteome-analyzer

Users that are interested in meta-proteome-analyzer are comparing it to the libraries listed below

• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆76Updated 3 years ago
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆31Updated 3 weeks ago
• biocore / tcga
  Microbial analysis in TCGA data
  ☆92Updated last year
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆156Updated last year
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆116Updated last week
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆98Updated last week
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated 2 years ago
• LJI-Bioinformatics / Excel-Reverse-Complement
  A simple add-in for Excel supplying functions to calculate the reverse, complement, and reverse-complement of a nucleotide sequence
  ☆45Updated 3 years ago
• aryeelab / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆80Updated 2 years ago
• sequana / sequana
  Sequana: a set of Snakemake NGS pipelines
  ☆151Updated 3 weeks ago
• nf-core / fetchngs
  Pipeline to fetch metadata and raw FastQ files from public databases
  ☆183Updated 3 weeks ago
• biocore / mmvec
  Neural networks for microbe-metabolite interaction analysis
  ☆125Updated 3 years ago
• mckennalab / FlashFry
  FlashFry: The rapid CRISPR target site characterization tool
  ☆77Updated last year
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆107Updated 6 months ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• signalbash / how_are_we_stranded_here
  Check strandedness of RNA-Seq fastq files
  ☆128Updated 3 years ago
• Zhong-Lab-UCSD / Genomic-Interactive-Visualization-Engine
  Genomic Interactive Visualization Engine
  ☆146Updated 2 years ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆142Updated last month
• linsalrob / fastq-pair
  Match up paired end fastq files quickly and efficiently.
  ☆153Updated last year
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆143Updated last month
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆128Updated 3 weeks ago
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆139Updated 5 years ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆100Updated 4 months ago
• ExpressionAnalysis / ea-utils
  Automatically exported from code.google.com/p/ea-utils
  ☆96Updated 2 years ago
• melbournebioinformatics / melbournebioinformatics.github.io
  Melbourne Bioinformatics documentation in markdown format
  ☆120Updated this week
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆50Updated 2 years ago
• nloyfer / wgbs_tools
  tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
  ☆175Updated last week
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆34Updated 4 months ago
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆107Updated 3 years ago
• kvittingseerup / IsoformSwitchAnalyzeR
  An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
  ☆120Updated last week