GPU-accelerated evaluation of perturbation prediction models
☆36Nov 3, 2026Updated this week
Alternatives and similar repositories for cell-eval2
Users that are interested in cell-eval2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PIE is a perturbation effect prediction model that generalizes to unseen biological conditions☆64Oct 27, 2026Updated last week
- pytorch dataloaders for single-cell perturbation data☆56Jul 18, 2026Updated 3 months ago
- ☆12Mar 22, 2023Updated 3 years ago
- Virtual Embryo Challenge (VEC) local scorer: score a submitted .h5ad against the T1/T2/T3 metric panels, offline, against reference files…☆17Oct 15, 2026Updated 3 weeks ago
- X-Cell: a diffusion language model for genome-scale perturbation prediction☆131Mar 16, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An open-source, Web-based computer aided design (CAD) tool for synthetic biology built on the SBOL standard☆16Dec 22, 2022Updated 3 years ago
- Repository for reproducing figures and tables for the study titled, "Mapping spatial organization and genetic cell state regulators to ta…☆10Sep 5, 2024Updated 2 years ago
- Code and analysis resources for reproducing the UniPert-G2CP study.☆17May 25, 2026Updated 5 months ago
- parallel differential expression for single-cell perturbation sequencing☆31Aug 26, 2026Updated 2 months ago
- Comprehensive suite for evaluating perturbation prediction models☆167Jul 27, 2026Updated 3 months ago
- A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the…☆12Nov 1, 2026Updated last week
- ☆16Apr 4, 2023Updated 3 years ago
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆743Jul 24, 2026Updated 3 months ago
- Digital Longevity Research☆19Oct 7, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆27Oct 28, 2026Updated last week
- Scripts for analysis of genome-wide perturb-seq in primary human T cells☆28Aug 28, 2026Updated 2 months ago
- Single cell manifold generator (SCMG)☆15Oct 22, 2026Updated 2 weeks ago
- ☆144Feb 13, 2025Updated last year
- Toolbox for the processing and analysis of MALDI-MSI data☆16Sep 10, 2025Updated last year
- A reproducible Nextflow DSL2 framework for standardized deployment, execution, and evaluation of single-cell foundation models (scFMs) wi…☆11Sep 3, 2026Updated 2 months ago
- Counterfactual Generative Modeling with Variational Causal Inference (ICLR 2025)☆22Sep 30, 2025Updated last year
- ☆17Oct 29, 2025Updated last year
- Generative modeling of spatially resolved perturbation responses with CONCERT☆29Oct 18, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆48Updated this week
- Data analysis for the scBaseCount manuscript☆15Oct 29, 2026Updated last week
- MLGenX BioReasoning Challenge 2026☆16Oct 9, 2026Updated 3 weeks ago
- A repository of datasets in ProteomeXchange annotated in SDRF, previously part of the specification☆16Updated this week
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries☆51Oct 14, 2026Updated 3 weeks ago
- ☆14Jun 21, 2025Updated last year
- ☆19Mar 19, 2026Updated 7 months ago
- A framework based on AlphaFold3 to improve the specificity of genome editor☆18Jun 1, 2026Updated 5 months ago
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆45Sep 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆58May 27, 2026Updated 5 months ago
- Modeling complex perturbations with CellFlow☆167Updated this week
- Code for paper: "Learning Diffusion Models with Flexible Representation Guidance"☆16Mar 18, 2026Updated 7 months ago
- ☆13Dec 17, 2024Updated last year
- Collection of Quantum Mechanical Dataset Relevant for Biomolecules☆12Oct 16, 2026Updated 3 weeks ago
- SpotSweeper-py: Python version of SpotSweeper package☆11Sep 6, 2026Updated 2 months ago
- Metagraph Open Data and Query on AWS☆11Aug 17, 2025Updated last year