Automated and parallel pipeline for the Curation of UltraconseRved Elements
☆10Jan 16, 2025Updated last year
Alternatives and similar repositories for CURE
Users that are interested in CURE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- World Catalog of Ants☆21Jul 17, 2026Updated last week
- PhyloAln: a convenient reference-based tool to align sequences and high-throughput reads for phylogeny and evolution in the omic era☆18Apr 16, 2026Updated 3 months ago
- spruceup☆25Aug 15, 2025Updated 11 months ago
- SimPhy: A comprehensive simulator of gene family evolution☆36Jun 30, 2023Updated 3 years ago
- TaxonPages is a tool to serve TaxonPages.☆15Jul 17, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A pipeline for de novo assembly of population-level sequence capture datasets.☆12Nov 6, 2018Updated 7 years ago
- A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.☆12Apr 25, 2024Updated 2 years ago
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated 2 years ago
- A Python library for generating random phylogenetic trees and related data☆13Jul 4, 2022Updated 4 years ago
- Phylommand is a software package to create, manipulate, and/or analyze phylogenetic trees or pairwise alignments.☆11Sep 5, 2024Updated last year
- ☆14Aug 26, 2022Updated 3 years ago
- Quartet-based species tree and tree of blob estimation☆16Jul 3, 2026Updated 3 weeks ago
- A Model Context Protocol (MCP) server that provides comprehensive access to the NCBI Datasets API☆16Dec 21, 2025Updated 7 months ago
- ☆15Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Distributed Evolutionary Algorithms in Python - Entirely Reworked☆14Aug 10, 2024Updated last year
- Simulating paired-end short sequencing reads from circular and linear genomes☆17May 14, 2021Updated 5 years ago
- software for UCE (and general) phylogenomics☆89Feb 27, 2026Updated 4 months ago
- Pop!_OS theme for Mailspring☆18Sep 21, 2021Updated 4 years ago
- a simple tool for listing conda environments with descriptions☆16Mar 28, 2025Updated last year
- Visualizing gene tree conflict using Phyparts, and ETE3☆15Jun 17, 2023Updated 3 years ago
- survival game for terminal☆11Jul 4, 2025Updated last year
- MIRA sequence assembler☆33Jan 2, 2025Updated last year
- My awesome wm config☆15Sep 17, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization☆24Jun 29, 2026Updated 3 weeks ago
- Nvidia overclocking script for Linux (useful for autostarting!)☆13Aug 16, 2020Updated 5 years ago
- Sorts amplicons from Nanopore sequencing data based on similarity☆45Oct 9, 2025Updated 9 months ago
- Scripts for homology and orthology assessment from genomic sequences.☆19Updated this week
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 4 years ago
- ☆23Aug 1, 2024Updated last year
- Chinese tables for IBus-Table☆18Sep 9, 2025Updated 10 months ago
- Latex Preview Plugin for Vim☆16Aug 8, 2022Updated 3 years ago
- Setup vim as a modern Python IDE in 5 minutes☆11Dec 28, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PhyloDeep is a python library for parameter estimation and model selection from phylogenetic trees, based on deep learning.☆30Updated this week
- Links for Ecology and Evolution☆23Jul 15, 2019Updated 7 years ago
- R We There Yet?☆33Mar 27, 2025Updated last year
- R tools for posterior analyses using BEAST☆20Apr 10, 2019Updated 7 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆27Jan 18, 2023Updated 3 years ago
- A minimalist tree plotting library using toyplot graphs☆199Updated this week
- The Ragie python client☆58Jun 3, 2026Updated last month