nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and lasso. Trained on 120+ diverse 3D datasets, it sets a new standard in accuracy, usability, and adaptability for clinical and research applications.
☆412Jun 4, 2026Updated last week
Alternatives and similar repositories for nnInteractive
Users that are interested in nnInteractive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,…☆117Jun 3, 2026Updated last week
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆142May 13, 2026Updated 3 weeks ago
- [TPAMI 2026] Large-Scale 3D Medical Image Pre-training with Geometric Context Priors☆267Apr 9, 2026Updated 2 months ago
- LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.☆109Apr 1, 2026Updated 2 months ago
- ☆154Oct 7, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,782Updated this week
- ☆54May 18, 2026Updated 3 weeks ago
- The official code for "SegVol: Universal and Interactive Volumetric Medical Image Segmentation".☆382Jan 11, 2026Updated 5 months ago
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆94Updated this week
- [NeurIPS 2024] Touchstone - Benchmarking AI on 5,172 o.o.d. CT volumes and 9 anatomical structures☆137Nov 24, 2025Updated 6 months ago
- SAM-Med3D: An Efficient General-purpose Promptable Segmentation Model for 3D Volumetric Medical Image☆927Sep 21, 2025Updated 8 months ago
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆305Nov 24, 2025Updated 6 months ago
- [MICCAI2024&RedJournal2026] Is deep learning ready for abdominal organ-at-risk segmentation in the foundation model era: A comprehensive …☆62Jul 30, 2024Updated last year
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆31Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆157Updated this week
- [ICCV 2025] AbdomenAtlas 3.0 (9,262 CT volumes + medical reports). These “superhuman” reports are more accurate, detailed, standardized, …☆213Dec 31, 2025Updated 5 months ago
- ☆14Dec 22, 2025Updated 5 months ago
- Python wrapper to unify reading/writing via NiBabel, pynrrd and SimpleITK within a unified and simple interface.☆18Apr 10, 2026Updated 2 months ago
- ☆8,515Updated this week
- MSHub: Medical Image Segmentation Hub with Pre-trained nnUNets☆23Feb 28, 2025Updated last year
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆327Jun 1, 2026Updated last week
- [ICCV 2025] Dataset of 10,135 abdominal CT scans with 15,130 tumors annotated across six organs and 5,893 controls. The AI ranks first in…☆59Nov 3, 2025Updated 7 months ago
- [ICLR 2024 oral; top 1.2%] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)☆420Jan 13, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up un…☆370Sep 3, 2024Updated last year
- This is a joint project between Helmholtz Imaging (located at DKFZ) and Lin Yang and Otmar Schmid (Helmholtz Munich).☆13Nov 6, 2024Updated last year
- ☆54Feb 10, 2025Updated last year
- A nnU-Netv2 based acceleration solution for Abdominal organs and tumor segmentation.☆21Nov 24, 2023Updated 2 years ago
- ☆13May 17, 2025Updated last year
- MedIA 2025 | A-Eval: A Benchmark for Cross-Dataset and Cross-Modality Evaluation of Abdominal Multi-Organ Segmentation☆34Feb 17, 2025Updated last year
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆141Dec 8, 2025Updated 6 months ago
- Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"☆68Aug 11, 2025Updated 9 months ago
- The official respository of paper ''Coordinating Anatomical-Textual Prompts for Multi-Organ and Tumor Segmentation''☆26Jan 11, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MONAI Versatile Imaging Segmentation and Annotation☆284Jun 3, 2026Updated last week
- Holistic Adaptation of SAM from 2D to 3D for Promptable Medical Image Segmentation☆208Mar 18, 2024Updated 2 years ago
- ☆47Dec 22, 2024Updated last year
- [MICCAI 2023] Continual Learning for Abdominal Multi-Organ and Tumor Segmentation☆79Jul 30, 2024Updated last year
- [npj Digital Medicine] The official repository for "Large-Vocabulary Segmentation for Medical Images with Text Prompts"☆301Dec 29, 2025Updated 5 months ago
- [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.☆510Nov 2, 2024Updated last year
- [CVPR 2024] Generalizable Tumor Synthesis - Realistic Synthetic Tumors in Liver, Pancreas, and Kidney☆216Feb 18, 2026Updated 3 months ago