Alternatives and similar repositories for nnInteractive

Users that are interested in nnInteractive are comparing it to the libraries listed below

• coendevente / SlicerNNInteractive
  A 3D Slicer extension for efficient segmentation with nnInteractive.
  ☆99Updated last month
• arcadelab / FastSAM3D
  Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"
  ☆104Updated 7 months ago
• ENHANCE-PET / MOOSE
  MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…
  ☆274Updated this week
• bowang-lab / MedSAMSlicer
  3D Slicer Plugin for Segment anything in medical images
  ☆260Updated 6 months ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆112Updated 10 months ago
• Project-MONAI / VISTA
  MONAI Versatile Imaging Segmentation and Annotation
  ☆237Updated 2 weeks ago
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆117Updated 4 months ago
• MIC-DKFZ / napari-nninteractive
  ☆100Updated 2 weeks ago
• uncbiag / uniGradICON
  uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)
  ☆175Updated last month
• MIC-DKFZ / nnssl
  ☆106Updated 2 weeks ago
• hhaentze / MRSegmentator
  ☆141Updated 2 months ago
• bingogome / samm
  A 3D Slicer integration to Meta's SAM.
  ☆248Updated last year
• lassoan / SlicerTotalSegmentator
  Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
  ☆229Updated 2 weeks ago
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆95Updated last month
• KitwareMedical / SlicerNNUnet
  3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.
  ☆48Updated 4 months ago
• anjany / verse
  Everything about the 'Large Scale Vertebrae Segmentation Challenge' @ MICCAI 2019-2020
  ☆244Updated 4 years ago
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆259Updated last year
• pyplati / platipy
  Processing Library and Analysis Toolkit for Medical Imaging in Python
  ☆137Updated 4 months ago
• Hendrik-code / spineps
  This is a segmentation pipeline to automatically, and robustly, segment the whole spine in T2w sagittal images.
  ☆51Updated last month
• MIRACLE-Center / CTSpine1K
  A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography
  ☆183Updated 5 months ago
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆291Updated 2 months ago
• neel-dey / anatomix
  [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis
  ☆83Updated 3 months ago
• eigenvivek / DiffDRR
  Auto-differentiable digitally reconstructed radiographs in PyTorch
  ☆228Updated this week
• MrGiovanni / SuPreM
  [ICLR 2024 Oral] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)
  ☆373Updated last month
• UMEssen / SALT
  Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…
  ☆81Updated last year
• arcadelab / FastSAM3D_slicer
  A 3D Slicer extension for FastSAM3D
  ☆19Updated last year
• SimpleITK / TUTORIAL
  ☆114Updated 3 weeks ago
• neheller / kits23
  The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)
  ☆121Updated 2 months ago
• lassoan / SlicerMONAIAuto3DSeg
  Extension for 3D Slicer for running MONAI Auto3DSeg models
  ☆100Updated last week
• Arturia-Pendragon-Iris / HiPaS_AV_Segmentation
  The supplementary code for the pulmonary artery-vein segmentation with various inter-slice thickness
  ☆42Updated last month