Alternatives and similar repositories for hpcc_modules

Users that are interested in hpcc_modules are comparing it to the libraries listed below

• lh3 / asub
  A unified array job submitter for LSF, SGE/UGE and Slurm
  ☆32Updated last year
• zhangjiajie / PTP
  PTP model for species delimitation
  ☆20Updated 6 years ago
• CBC-UCONN / Genome_Assembly
  ☆24Updated 9 months ago
• stamatak / ExaML
  Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI
  ☆50Updated 5 years ago
• kapsakcj / win10-linux-conda-how-to
  A tutorial on how to set up a Linux environment on a computer running Windows 10. Followed by how to install and use (bio)conda.
  ☆44Updated last year
• thednainus / Bayesian_tutorial
  Tutorial on Bayesian phylogenetic analysis
  ☆52Updated 8 years ago
• beast-dev / tracer
  Posterior summarisation in Bayesian phylogenetics
  ☆68Updated 4 months ago
• helixcn / phylotools
  Phylogenetic tools for Eco-phylogenetics
  ☆14Updated last year
• PawseySC / singularity-containers
  Webinars&Tutorial on Containers on HPC and Cloud with Singularity
  ☆27Updated 4 years ago
• ballesterus / UPhO
  Scripts for homology and orthology assessment from genomic sequences.
  ☆19Updated 5 years ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆35Updated 8 years ago
• vlasmirnov / MAGUS
  Graph Clustering Merger
  ☆36Updated last year
• davek44 / Glimmer-MG
  Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering
  ☆18Updated 10 years ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆27Updated 2 weeks ago
• smirarab / pasta
  PASTA (Practical Alignment using SATe and Transitivity)
  ☆95Updated 8 months ago
• ChrisCreevey / clann
  Clann: constructing consensus trees and supertrees from multiple source trees
  ☆18Updated 10 months ago
• alegarra / gs3
  GS3, software for genomic prediction and whole genome Bayesian analysis
  ☆10Updated 8 years ago
• cidgoh / bacpaq
  Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data
  ☆12Updated last month
• rambaut / Seq-Gen
  Sequence simulator
  ☆55Updated last year
• brettc / partitionfinder
  PartitionFinder discovers optimal partitioning schemes for DNA sequences.
  ☆71Updated 4 years ago
• popgenmethods / pyrho
  Fast inference of fine-scale recombination rates based on fused-LASSO
  ☆55Updated last month
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated last year
• wutron / dlcpar
  Modeling gene duplication, loss, and coalescence (through parsimony)
  ☆10Updated 5 years ago
• AndolfoG / HRP
  The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …
  ☆11Updated 2 years ago
• HpcGridRunner / HpcGridRunner
  source code for HpcGridRunner
  ☆16Updated 4 years ago
• katholt / plotTree
  ☆68Updated 9 years ago
• gtonkinhill / pairsnp
  A set of scripts for calculating pairwise SNP distance
  ☆44Updated 3 years ago
• guyleonard / orthomcl_tools
  A couple of tools I find indispensable for post orthomcl down-stream analysis.
  ☆11Updated 6 years ago
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 5 years ago
• blaxterlab / blobology
  Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …
  ☆47Updated 3 years ago