Scoring multiple sequence alignments with Python
☆23Jun 18, 2023Updated 3 years ago
Alternatives and similar repositories for pyMSA
Users that are interested in pyMSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics☆18Jan 6, 2026Updated 6 months ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Jun 15, 2026Updated last month
- Python driver for MobilityDB☆11May 1, 2026Updated 2 months ago
- BioBTree v2: An MCP-enabled biomedical graph database unifying 70+ datasets.☆19Updated this week
- A tool for timing complex copy number gains in cancer.☆21Dec 4, 2025Updated 7 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A fast multiple sequence alignment program.☆161Updated this week
- a fork of the gap-closing pipeline PBJelly☆15Jan 7, 2019Updated 7 years ago
- A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence☆115Updated this week
- A set of Deep Reinforcement Learning Agents implemented in Tensorflow.☆13Feb 5, 2017Updated 9 years ago
- A heterogeneous OpenCL implementation of QuickVina2☆17Jan 7, 2023Updated 3 years ago
- Eterna100-V2 benchmarking results and scripts☆14May 19, 2026Updated 2 months ago
- ☆20May 28, 2024Updated 2 years ago
- abPOA: an SIMD-based C library for fast partial order alignment using adaptive band☆15Jul 20, 2023Updated 3 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆38May 21, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Support vector machines implemented from scratch in Python.☆14Sep 16, 2025Updated 10 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆197Dec 1, 2024Updated last year
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Jul 2, 2026Updated 3 weeks ago
- ☆16May 23, 2023Updated 3 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- ☆12Mar 12, 2026Updated 4 months ago
- Sliding window dN/dS vs. functional protein domain comparison tool. Given VectorBase gene id inputs it will aggregate various useful Bioi…☆20Dec 10, 2024Updated last year
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Wrapper for the built-in Argparse, allowing missing command-line arguments to be filled in by the user via interactive prompts☆11Jun 19, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Jun 10, 2024Updated 2 years ago
- A Missile Command video game Atari clone coding in Python☆12Feb 3, 2024Updated 2 years ago
- ARCHIVED☆25Oct 2, 2020Updated 5 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Flask app with D3 integration.☆10Feb 27, 2015Updated 11 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 9 months ago
- Lightweight validation tool for checking function arguments and data analysis scripts.☆12Dec 24, 2024Updated last year
- ☆10Jun 28, 2025Updated last year
- This is a basic Redis Rate Limiting demo written in NodeJS☆13Jun 27, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- Javascript alignment viewer☆11Nov 29, 2023Updated 2 years ago
- TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning☆13Jun 19, 2023Updated 3 years ago
- Simple Line/Kakao-Papago Translation Bot.☆24Jul 27, 2017Updated 9 years ago
- Makes URLs prettier by removing the protocol prefix.☆11Jan 26, 2025Updated last year
- Exposing C structrs to R☆15Apr 27, 2022Updated 4 years ago