Scoring multiple sequence alignments with Python
☆23Jun 18, 2023Updated 3 years ago
Alternatives and similar repositories for pyMSA
Users that are interested in pyMSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆12Sep 1, 2026Updated 3 weeks ago
- Tools for manipulating biological data, particularly multiple sequence alignments☆161Sep 19, 2026Updated last week
- BioBTree v2: An MCP-enabled biomedical graph database unifying 70+ datasets.☆20Sep 2, 2026Updated 3 weeks ago
- A tool for timing complex copy number gains in cancer.☆22Sep 10, 2026Updated 2 weeks ago
- A fast multiple sequence alignment program.☆162Jul 22, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- a fork of the gap-closing pipeline PBJelly☆15Jan 7, 2019Updated 7 years ago
- A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence☆118Jul 21, 2026Updated 2 months ago
- A CRISPR repeat|spacer analysis tool☆19May 7, 2021Updated 5 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆38May 21, 2024Updated 2 years ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆200Dec 1, 2024Updated last year
- Python Clone of the game "Color Switch"☆10Oct 15, 2018Updated 7 years ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated last month
- VETA - A simple tool do evaluate variant predictors☆11Jun 17, 2024Updated 2 years ago
- ☆17May 23, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Aug 5, 2020Updated 6 years ago
- Sliding window dN/dS vs. functional protein domain comparison tool. Given VectorBase gene id inputs it will aggregate various useful Bioi…☆20Dec 10, 2024Updated last year
- ☆12Mar 12, 2026Updated 6 months ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Wrapper for the built-in Argparse, allowing missing command-line arguments to be filled in by the user via interactive prompts☆11Jun 19, 2020Updated 6 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Aug 24, 2026Updated last month
- A Missile Command video game Atari clone coding in Python☆12Feb 3, 2024Updated 2 years ago
- Curated list of resources for variant prioritization☆16Nov 18, 2025Updated 10 months ago
- ☆11Apr 25, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 11 months ago
- Lightweight validation tool for checking function arguments and data analysis scripts.☆12Dec 24, 2024Updated last year
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- ☆10Jun 28, 2025Updated last year
- ☆12Jun 13, 2024Updated 2 years ago
- This is a basic Redis Rate Limiting demo written in NodeJS☆14Jun 27, 2023Updated 3 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆290Sep 9, 2026Updated 2 weeks ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Javascript alignment viewer☆12Nov 29, 2023Updated 2 years ago
- Chorus: Heterogeneous GPU+CPU Multiple Protein Sequences Alignment Search for Large Database☆17Apr 7, 2025Updated last year
- Makes URLs prettier by removing the protocol prefix.☆11Jan 26, 2025Updated last year
- ☆12May 16, 2020Updated 6 years ago
- A Discord bot designed to streamline start.gg tournaments and improve user quality-of-life through specialized commands.☆13Sep 27, 2024Updated last year
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 3 years ago