tal-baum / drugbank_xml2csv_pythonLinks
Python script for processing DrugBank XML to MySQL-ready CSV files
☆18Updated 8 years ago
Alternatives and similar repositories for drugbank_xml2csv_python
Users that are interested in drugbank_xml2csv_python are comparing it to the libraries listed below
Sorting:
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 4 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆27Updated last year
- ☆19Updated 5 years ago
- Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures…☆19Updated last year
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 2 months ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- Method for drug repurposing from knowledge graphs and literature☆35Updated 4 years ago
- drugbank相关数据的处理，包括获取药物sdf结构文件，drug相关信息，drug作用相关蛋白信息，drugbank中drug id与其他数据库的映射，protein蛋白相关信息到其他数据库的映射☆22Updated 4 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆30Updated 4 months ago
- ☆13Updated 2 years ago
- ☆11Updated 5 years ago
- Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity☆29Updated 4 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines o…☆26Updated 4 years ago
- Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV …☆29Updated last year
- ☆57Updated 5 years ago
- Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…☆96Updated 3 years ago
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Updated 2 years ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 4 years ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 9 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Updated 3 years ago
- Resources for Drug Repurposing In Alzheimer's Disease (DRIAD) work☆11Updated 4 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- Processing SIDER 4.1: the side effect resource☆23Updated 9 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 4 years ago
- Network-based Drug Repurposing for Human Coronavirus☆40Updated 5 years ago
- ☆16Updated 3 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- Hierarchical Embedding for Drugs☆16Updated last year