Alternatives and similar repositories for cryoem

Users that are interested in cryoem are comparing it to the libraries listed below

• dzyla / EPU_beamtiltclasses
  Very simple script for EPU users which adds beam tilt classes to the star file
  ☆11Updated last year
• rsanchezgarc / micrograph_cleaner_em
  Cryo-EM micrograph segmentation through deep learning
  ☆21Updated 3 weeks ago
• wan-lab-vanderbilt / STOPGAP
  STOPGAP is a MATLAB-based package for subtomogram averaging.
  ☆35Updated 10 months ago
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆29Updated this week
• Guillawme / cryoEM-scripts
  Utilities to help cryoEM data analysis
  ☆20Updated 4 years ago
• joton / reliontomotools
  Complementary tools for Relion tomo
  ☆10Updated last year
• charbj / wiggle
  Graphical user interface to integrate cryoEM flexibility analyses with ChimeraX
  ☆23Updated 9 months ago
• azazellochg / 3DEM-conventions
  Conventions for 3DEM software packages
  ☆19Updated 3 years ago
• sami-chaaban / starparser
  Manipulate and mine Relion .star files
  ☆19Updated 7 months ago
• dzyla / MRC_napari_viewer
  Cryo-EM data viewer in napari
  ☆14Updated 4 years ago
• maxewilkinson / CryoEM-scripts
  Badly written scripts for making cryoEM easier
  ☆13Updated 4 years ago
• bionanopatterning / Ais
  ☆17Updated 3 weeks ago
• FrangakisLab / ArtiaX
  ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
  ☆34Updated 3 months ago
• bforsbe / OccuPy
  ☆17Updated 11 months ago
• DustinMorado / EPU_group_AFIS
  Makes RELION 3.1 Optics Groups from EPU AFIS data
  ☆17Updated 2 years ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆28Updated 5 months ago
• SBC-Utrecht / pytom-match-pick
  GPU-accelerated template matching for cryo-ET
  ☆41Updated this week
• turonova / novaCTF
  3D-CTF correction for cryo-electron tomography
  ☆26Updated 6 years ago
• StructuralBiology-ICLMedicine / SIDESPLITTER
  ☆17Updated 2 years ago
• JackZhang-Lab / Cryo-MEM
  A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…
  ☆12Updated last year
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆19Updated 10 months ago
• builab / subtomo2Chimera
  ☆19Updated 4 months ago
• brisvag / stemia
  Scripts and Tools for Electron Microscopy Image Analysis.
  ☆11Updated 8 months ago
• tomotools / tomotools
  Scripts to make cryo-electron tomography a bit easier
  ☆13Updated 2 months ago
• dzyla / Follow_Relion_gracefully
  New program to follow Relion projects in a browser!
  ☆42Updated last month
• alisterburt / dynamo2m
  a bidirectional interface between Dynamo and the Warp-RELION-M pipeline
  ☆18Updated last year
• evanseitz / ManifoldEM_Python
  ManifoldEM Python suite
  ☆16Updated 7 months ago
• EuanPyle / relion4_tomo_robot
  Automated workflow for preparing tilt series data for RELION 4.0.
  ☆14Updated last year
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated last month
• thomasfrosio / emClarity-tutorial
  ☆12Updated 2 years ago