simonEllershaw / llm-discharge-summaries
Code for the paper "Automated Generation of Hospital Discharge Summaries Using Clinical Guidelines and Large Language Models"
☆9Updated 6 months ago
Related projects ⓘ
Alternatives and complementary repositories for llm-discharge-summaries
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆50Updated 10 months ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆25Updated 7 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆39Updated 10 months ago
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆27Updated 8 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆140Updated this week
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆89Updated last year
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆38Updated last month
- General tutorials for the setup and use of MedCAT.☆31Updated last month
- Code and data for TrialGPT.☆45Updated 3 months ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆70Updated 3 weeks ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆31Updated this week
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆78Updated 5 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆86Updated 5 months ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆24Updated last year
- Python module to parse UMLS source files☆19Updated last year
- Clinical text summarization by adapting large language models☆120Updated 3 months ago
- Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…☆12Updated 4 months ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆74Updated 4 months ago
- The code for the paper "MediTab: Scaling Medical Tabular Data Predictors via Data Consolidation, Enrichment, and Refinement"☆18Updated 6 months ago
- ☆56Updated last year
- Winners of the SNOMED CT Entity Linking Challenge☆25Updated 7 months ago
- Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records☆18Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆29Updated 6 months ago
- all scripts used in gatortron project☆111Updated last year
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆24Updated last year
- [EMNLP'24] EHRAgent: Code Empowers Large Language Models for Complex Tabular Reasoning on Electronic Health Records☆65Updated last month
- CLUE: A Clinical Language Understanding Evaluation for LLMs☆14Updated 4 months ago
- ☆27Updated 3 years ago
- For Med-Gemini, we relabeled the MedQA benchmark; this repo includes the annotations and analysis code.☆35Updated 5 months ago