sib-swiss / first-steps-with-R-training
repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
☆46Updated 2 months ago
Alternatives and similar repositories for first-steps-with-R-training:
Users that are interested in first-steps-with-R-training are comparing it to the libraries listed below
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 4 years ago
- Intro to Shell for Bioinformatics - with STG examples☆28Updated 8 years ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆14Updated 3 weeks ago
- ☆48Updated 4 years ago
- My youtube programming scripts☆52Updated 3 months ago
- This RNAseq data analysis tutorial is created for educational purpose☆33Updated 2 months ago
- RNA-Seq analysis workflow☆104Updated 3 years ago
- ☆72Updated 3 years ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆51Updated 6 months ago
- website for the rnaseq course☆98Updated 4 months ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆115Updated 11 months ago
- ☆59Updated 11 months ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Updated 3 years ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆78Updated last week
- ☆56Updated last year
- ☆45Updated 5 years ago
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 7 months ago
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- Repo for student website☆24Updated last month
- Bioinformatics one-liner for 100 days☆47Updated last year
- coding exercise using TCGA immune infiltration data☆45Updated last year
- Issue tracker for the Biostar Handbook☆62Updated 2 years ago
- ☆31Updated 2 months ago
- Easily install and load packages from the tidyomcis ecosystem☆67Updated last year
- Tutorials on accessing public reference and genomic data☆30Updated 2 months ago
- A repository for large-scale microbiome datasets, formatted for phyloseq☆38Updated last year
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 2 months ago
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆56Updated last year
- Generate IGV style locus tracks from bigWig files in R☆158Updated 5 months ago