Alternatives and similar repositories for snakemake-slurm-tutorial:

Users that are interested in snakemake-slurm-tutorial are comparing it to the libraries listed below

• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 10 years ago
• seandavi / SRAdbV2
  R Interface to the NCBI SRA metadata
  ☆23Updated 6 years ago
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆45Updated 4 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆39Updated last year
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 3 years ago
• cannin / snp_plotter
  snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.
  ☆19Updated last year
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 3 months ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated 4 months ago
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆21Updated 3 months ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆36Updated last year
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated last year
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 6 months ago
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 4 years ago
• kkdey / aRchaic
  Exploration, clustering, visualization and classification of DNA damage patterns
  ☆19Updated 4 years ago
• kendomaniac / docker4seq
  Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.
  ☆25Updated 7 months ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆28Updated 8 months ago
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆37Updated 2 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated 2 months ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• G3viz / g3viz
  Lollipop-diagram to interactively visualize genetic mutations
  ☆31Updated 6 months ago
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆22Updated 2 months ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆20Updated 7 years ago
• zhengxwen / SeqArray
  Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)
  ☆45Updated this week
• MonashBioinformaticsPlatform / varistran
  R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
  ☆20Updated 2 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 3 months ago
• aboyle / F-seq
  A Feature Density Estimator for High-Throughput Sequence Tags
  ☆23Updated 3 years ago
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆33Updated 7 years ago