Alternatives and similar repositories for KOR_HCC

Users that are interested in KOR_HCC are comparing it to the libraries listed below

• llniu / ALD-study
  ALD study data analysis
  ☆13Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆59Updated last year
• jmzeng1314 / METABRIC
  ☆44Updated 6 years ago
• yjgeno / GenKI
  ☆24Updated last year
• jasonHKU0907 / proteome-phenome-atlas
  ☆74Updated 11 months ago
• BostonGene / Kassandra
  Bostongene cell deconvolution algorithm from RNAseq
  ☆60Updated 2 years ago
• lanagarmire / Asgard
  ☆45Updated 2 years ago
• ImmucanWP7 / immucan-scdb
  ☆17Updated 2 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆75Updated 5 years ago
• WangJin93 / PCAS
  The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…
  ☆20Updated 7 months ago
• KChen-lab / METAFlux
  ☆82Updated last year
• pathint / reoa
  Relative Expression Ordering Analysis (REOA) package
  ☆21Updated 3 years ago
• jokergoo / ComplexHeatmap_v2_paper_code
  ☆19Updated 3 years ago
• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆37Updated 5 years ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆28Updated 2 years ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆142Updated this week
• Zaoqu-Liu / IRLS
  Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…
  ☆126Updated 8 months ago
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆128Updated last year
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated 2 years ago
• Zaoqu-Liu / SurvivalML
  Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors
  ☆46Updated 10 months ago
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆68Updated last year
• SmritiChawla / Precily
  ☆34Updated 3 years ago
• ding-lab / PanCan_snATAC_publication
  ☆20Updated last year
• jmzeng1314 / TCGA_BRCA
  ☆47Updated 6 years ago
• ggjlab / HCL
  Tools used in Human Cell Landscape(HCL)
  ☆56Updated 5 years ago
• saezlab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆107Updated 2 years ago
• BioinformaticsFMRP / PanCanStem_Web
  ☆32Updated 4 years ago
• JinmiaoChenLab / Batch-effect-removal-benchmarking
  A benchmark of batch-effect correction methods for single-cell RNA sequencing data
  ☆79Updated 4 years ago
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆40Updated 4 years ago
• JianYang-Lab / MeDuSA
  MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…
  ☆43Updated 11 months ago