sanger / sequencescape
Web based LIMS
☆90Updated this week
Alternatives and similar repositories for sequencescape:
Users that are interested in sequencescape are comparing it to the libraries listed below
- is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and report…☆72Updated 3 months ago
- A Python library for interacting with the Galaxy API☆90Updated 2 weeks ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated last year
- a Medical Genetics Sequence Analysis Pipeline☆80Updated this week
- Smart VCF parser DSL☆82Updated 2 years ago
- Moved to: https://github.com/maxplanck-ie/parkour2☆33Updated 2 years ago
- ☆21Updated last year
- Extensible specification for representing and uniquely identifying biological sequence variation☆86Updated this week
- conda recipes for genomic data☆85Updated 3 years ago
- ☆35Updated last year
- Browser for ExAC consortium data☆106Updated 3 years ago
- Rails frontend to The Genome Institute's drug gene interaction database.☆95Updated last year
- Annotation of VCF variants with functional impact and from databases (executable+library)☆58Updated 2 weeks ago
- Config files used to define parameters specific to compute environments at different Institutions☆94Updated last week
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆144Updated this week
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆81Updated 4 months ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆96Updated 9 months ago
- Baobab LIMS is an open-source laboratory information management system (LIMS)☆77Updated 2 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆46Updated this week
- Scripts, utilities and programs for genomic bioinformatics.☆81Updated last week
- Variant calling tool for long-read sequencing data☆104Updated 3 weeks ago
- profile basd Illumina pair-end Reads Simulator☆27Updated last year
- GenPipes Read the Docs repository☆21Updated 2 weeks ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 5 years ago
- Documentation and description of AWS iGenomes S3 resource.☆109Updated 2 months ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- A novel pipeline framework to accelerate bioinformatics analysis☆29Updated last year
- Galaxy RNA workbench☆39Updated 4 years ago