Alternatives and similar repositories for sequencescape:

Users that are interested in sequencescape are comparing it to the libraries listed below

• BU-ISCIII / iskylims
  is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and report…
  ☆74Updated last month
• dgidb / dgidb
  Rails frontend to The Genome Institute's drug gene interaction database.
  ☆95Updated 2 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated 2 years ago
• BaobabLims / baobab.lims
  Baobab LIMS is an open-source laboratory information management system (LIMS)
  ☆80Updated 2 years ago
• MatthewHiggins2017 / bioconda-PrimedRPA
  ☆22Updated last year
• galaxyproject / bioblend
  A Python library for interacting with the Galaxy API
  ☆90Updated 3 weeks ago
• Ensembl / ensembl-pipeline
  *DEPRECATED* Job management for the Ensembl Genebuild pipeline
  ☆62Updated last year
• maxplanck-ie / parkour
  Moved to: https://github.com/maxplanck-ie/parkour2
  ☆33Updated 2 years ago
• chanzuckerberg / czid-workflows
  Portable WDL workflows for CZ ID production pipelines
  ☆43Updated last week
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆83Updated 6 months ago
• imgag / megSAP
  a Medical Genetics Sequence Analysis Pipeline
  ☆81Updated last week
• daler / metaseq
  Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
  ☆87Updated 4 years ago
• biosql / biosql
  ☆88Updated 6 years ago
• tao-bioinfo / PrimerServer2
  PrimerServer2: a high-throughput primer design and specificity-checking platform
  ☆77Updated 2 years ago
• PacificBiosciences / ccs
  CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
  ☆118Updated last year
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• genome / genome
  Core modules used by the GMS
  ☆65Updated last year
• miso-lims / miso-lims
  MISO: An open-source LIMS for NGS sequencing centres
  ☆273Updated this week
• tjparnell / biotoolbox
  Tools for querying and analysis of genomic data
  ☆27Updated 4 months ago
• ncbi / magicblast
  ☆36Updated this week
• fls-bioinformatics-core / genomics
  Scripts, utilities and programs for genomic bioinformatics.
  ☆82Updated last week
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆62Updated 7 years ago
• Steven-N-Hart / vcf-miner
  VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files
  ☆37Updated 5 years ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• c3g / GenPipes_Docs
  GenPipes Read the Docs repository
  ☆21Updated this week
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆88Updated 5 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• zwdzwd / transvar
  TransVar - multiway annotator for precision medicine
  ☆125Updated 2 years ago
• Clinical-Genomics / genmod
  Annotate models of genetic inheritance patterns in variant files (vcf files)
  ☆79Updated last week