Rigid Body Dynamics with OpenMM
☆12May 29, 2018Updated 7 years ago
Alternatives and similar repositories for openmm_rigidbody_plugin
Users that are interested in openmm_rigidbody_plugin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆39May 28, 2025Updated 9 months ago
- An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM☆19Jan 12, 2026Updated 2 months ago
- Software for automated processing of alchemical free energy calculations☆11Nov 7, 2022Updated 3 years ago
- Unified Free Energy Dynamics (UFED) simulations with OpenMM☆35Aug 20, 2025Updated 7 months ago
- ☆24Jun 16, 2025Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python library to run structure based model (SBM) simulations using the OpenMM toolkit☆24Jan 16, 2026Updated 2 months ago
- Implementation of MOFF force field. Please cite us at Latham, A; Zhang, B J. Chem. Theory Comput. 2021, 17, 3134. (https://pubs.acs.org/d…☆10Jun 16, 2022Updated 3 years ago
- OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.☆12Feb 20, 2026Updated last month
- Useful Collective Variables for OpenMM☆17May 9, 2024Updated last year
- Funnel maker is a set of scripts that sets up funnel metadynamics simulations for protein-ligand binding with PLUMED and OpenMM.☆15Jan 3, 2026Updated 2 months ago
- OpenMM implementation of MOFF, MRG-CG, and HPS models.☆37Jan 16, 2026Updated 2 months ago
- Coarse-grained molecular model of DNA (LAMMPS plugin)☆17Apr 12, 2022Updated 3 years ago
- A Python module for carrying out GCMC insertions and deletions of water molecules in OpenMM.☆75Jun 12, 2023Updated 2 years ago
- Tools to build coarse grained models and perform simulations with OpenMM☆25Dec 16, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Repository for MD methods and analysis from submitted or published work☆20Jun 10, 2023Updated 2 years ago
- ☆18Dec 29, 2025Updated 2 months ago
- Getting started docs, examples, tutorials, and use cases.☆11Jun 15, 2021Updated 4 years ago
- ☆64Dec 10, 2025Updated 3 months ago
- Build scripts for PyTorch @ NERSC☆12Dec 27, 2025Updated 3 months ago
- ☆11Aug 19, 2025Updated 7 months ago
- Soft benchmark sets for alchemical free energy calculations, for assessing their accuracy on biomolecular systems☆16Mar 8, 2019Updated 7 years ago
- Coarse-graining library that implements Force-matching☆11Aug 31, 2020Updated 5 years ago
- Package to perform minimum-distance distribution analyses of complex solute-solvent interactions☆23Updated this week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Playmol is a(nother) software for building molecular models☆19Mar 14, 2023Updated 3 years ago
- ☆11Aug 29, 2022Updated 3 years ago
- Tree Search Molecular Dynamics Simulation☆11Aug 25, 2019Updated 6 years ago
- example demonstrating a free energy estimation starting from OFF and OpenMM☆12Oct 21, 2020Updated 5 years ago
- Development/testing repo for SWIG+Fortran☆11Mar 25, 2018Updated 8 years ago
- A Python assistant for performing and analyzing molecular dynamics simulations of soft matter systems☆18Aug 20, 2025Updated 7 months ago
- Continuum Dynamics Evaluation and Test Suite☆15Aug 29, 2017Updated 8 years ago
- Explore a state machine mechanism/notation for Simpy☆12May 24, 2022Updated 3 years ago
- A Python toolkit for the analyis of lipid membrane simulations☆34Oct 24, 2025Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Vantage point tree implementation in OCaml☆19Apr 22, 2025Updated 11 months ago
- ☆38Jan 31, 2022Updated 4 years ago
- ☆44Feb 15, 2022Updated 4 years ago
- Public code base for the Accelerated Molecular Discovery (AMD) platform☆11Nov 17, 2023Updated 2 years ago
- Full automation of relative protein-ligand binding free energy calculations in GROMACS☆46May 3, 2021Updated 4 years ago
- Repository with code supporting PNAS article☆11Jun 6, 2023Updated 2 years ago
- MDAnalysis wrapper around Packmol☆37May 1, 2023Updated 2 years ago