Alternatives and similar repositories for protcad

Users that are interested in protcad are comparing it to the libraries listed below

• bene837 / af2seq
  ☆47Updated last year
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 11 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆38Updated 3 years ago
• xuhuihuang / featuredock
  FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer
  ☆39Updated last year
• KULL-Centre / papers
  Material from papers from KULL centre
  ☆71Updated last year
• jssweller / DrugHIVE
  DrugHIVE: Structure-based drug design with a deep hierarchical generative model
  ☆109Updated last year
• dina-lab3D / CombFold
  ☆91Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 3 years ago
• patrickbryant1 / RareFold
  Structure prediction and design of proteins with noncanonical amino acids
  ☆117Updated last week
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆72Updated 2 years ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆97Updated 8 months ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆98Updated last year
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆108Updated last week
• NVIDIA-Digital-Bio / la-proteina
  A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…
  ☆265Updated 4 months ago
• sokrypton / af_backprop
  ☆37Updated last year
• tiejundong / FlexPose
  FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.
  ☆55Updated 2 years ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆70Updated 2 years ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆78Updated 3 months ago
• ELELAB / RosettaDDGPrediction
  ☆84Updated 2 months ago
• jwohlwend / minifold
  MiniFold: Simple, Fast and Accurate Protein Structure Prediction
  ☆82Updated 6 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆62Updated 5 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆63Updated 3 months ago
• abhinadduri / panspecies-dti
  Structure-aware PRotein ligand INTeraction (SPRINT) is a ultrafast deep learning framework for drug-target interaction prediction.
  ☆13Updated last week
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆43Updated last year
• ohuelab / ColabDesign-cyclic-binder
  ☆37Updated 2 years ago
• AbSciBio / unlocking-de-novo-antibody-design
  ☆136Updated last year
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆94Updated 5 years ago
• rxn4chemistry / biocatalysis-model
  RXN for biochemical reactions
  ☆73Updated 3 years ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆76Updated 2 months ago