karma211225 / KarmaLoopLinks
Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
☆12Updated last year
Alternatives and similar repositories for KarmaLoop
Users that are interested in KarmaLoop are comparing it to the libraries listed below
Sorting:
- scripts to find PBD structures for cancer driver proteins☆31Updated 4 months ago
- ☆32Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 7 months ago
- Generative diverse protein backbones by protein language model☆32Updated 6 months ago
- ☆33Updated last year
- ☆23Updated 8 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Baseline model for PPB-Affinity benchmark data☆25Updated last month
- IDPFold test version☆21Updated 9 months ago
- Code for the paper "Learning to engineer protein flexibility".☆18Updated 2 months ago
- Converts AlphaFold distograms into distance matrices and saves them into a number of formats☆12Updated 2 years ago
- PoseX: A Molecular Docking Benchmark☆41Updated 3 weeks ago
- ☆38Updated 9 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆37Updated 2 months ago
- Interface-aware molecular generative framework for protein-protein interaction modulators☆14Updated 6 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated last year
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆11Updated 9 months ago
- ☆40Updated last year
- ☆36Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆33Updated 3 months ago
- ☆48Updated last month
- Folding-Docking-Affinity framework for protein-ligand affinity prediction☆26Updated 3 months ago
- ☆27Updated last week
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆23Updated last year
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆13Updated 6 months ago
- A benchmark for 3D biomolecular structure prediction models☆60Updated last month
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆53Updated last year
- Modelling protein conformational landscape with Alphafold☆51Updated 2 weeks ago
- ☆28Updated last month