snakemake grammar for tree-sitter, based on tree-sitter-python
☆12Sep 18, 2025Updated 7 months ago
Alternatives and similar repositories for tree-sitter-snakemake
Users that are interested in tree-sitter-snakemake are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An awesome tool to visualize snakemake rule graphs☆32Updated this week
- an example of building up a targets analysis for -omics data☆12Jun 23, 2023Updated 2 years ago
- Go code for working with htmx☆14Jun 1, 2023Updated 2 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Apr 19, 2018Updated 8 years ago
- remap C-n and C-p in firefox and tor for search bar navigation. Makes the keybindings more consistent with emacs.☆12Nov 1, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Apr 16, 2026Updated 2 weeks ago
- Snakemake module for the snpArcher pipeline for population size change inference.☆10Nov 12, 2024Updated last year
- Random stuff for BLUPF90 programs☆17Aug 28, 2023Updated 2 years ago
- ☆16Aug 25, 2025Updated 8 months ago
- SvelteJS + fastapi + docker-compose (with mongodb and material ui support)☆17Jan 26, 2026Updated 3 months ago
- Partial reimplementation of bcftools for VCF Zarr☆24Apr 29, 2026Updated last week
- gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling☆15Nov 6, 2025Updated 6 months ago
- Algorithm to detect germline and de novo transposon insertions☆34Aug 14, 2025Updated 8 months ago
- A simple python program to convert graphical circuits to quantikz figures.☆14Aug 23, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!☆19Updated this week
- Set up your GitHub Actions workflow with a specific version of Zig (https://ziglang.org/).☆19Oct 5, 2024Updated last year
- Customer workshop materials☆19Apr 16, 2026Updated 2 weeks ago
- A post-mapping authentication toolkit for ancient metagenomics☆20Mar 30, 2026Updated last month
- A bunch of shell scripts and files dedicated to my use of Git☆13Jan 30, 2018Updated 8 years ago
- Python Tools for Quantum Error Correction☆25Apr 27, 2026Updated last week
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- A Rust-based library for phylogenetic analysis and manipulation☆19Feb 10, 2026Updated 2 months ago
- Zigualizer: A music visualizer built with Zig, powered by the FFT algorithm.☆30Nov 19, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package implementing affinity propagation clustering along with various utilities☆12Sep 9, 2025Updated 7 months ago
- Official webpage of the Programming Group on https://programming-group.com☆12Apr 29, 2026Updated last week
- Accelerated Bayesian inference of population size history from whole genome data.☆35Apr 6, 2026Updated last month
- Hummingbird: Efficient Performance Prediction for Executing Genomic Applications in the Cloud: https://doi.org/10.1093/bioinformatics/bta…☆20Jul 19, 2024Updated last year
- ☆14Feb 4, 2025Updated last year
- g-suite add-on for merging sheets data into docs templates☆11Jun 21, 2019Updated 6 years ago
- Process consensus file for COG-UK data☆13Sep 7, 2021Updated 4 years ago
- A simple FastAPI server to manage workspaces and multi-user sharing within MinIO.☆22Oct 25, 2020Updated 5 years ago
- Various tools for EBNF grammars☆11Feb 6, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Sep 22, 2017Updated 8 years ago
- http://tinyurl.com/cruk-shiny☆10Sep 13, 2017Updated 8 years ago
- Enrich an Org-table with reference tables☆40Apr 12, 2026Updated 3 weeks ago
- C++ wrapper to tabix indexer☆17Jun 27, 2025Updated 10 months ago
- A repo of some demo code for DjangoCon AU 2023☆23Aug 18, 2023Updated 2 years ago
- Standard ML (SML) grammar for tree-sitter☆14May 22, 2025Updated 11 months ago
- Quality of life improvements for Bioinformatics in Python.☆32Apr 29, 2026Updated last week