Medical image processing in Python
☆617Sep 3, 2024Updated last year
Alternatives and similar repositories for medpy
Users that are interested in medpy are comparing it to the libraries listed below
Sorting:
- A framework for data augmentation for 2D and 3D image classification and segmentation☆1,172Mar 25, 2025Updated 11 months ago
- Library to compute surface distance based performance metrics for segmentation tasks.☆593Feb 19, 2025Updated last year
- SOTA medical image segmentation methods based on various challenges☆1,659Dec 12, 2023Updated 2 years ago
- The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net…☆1,348Jun 17, 2024Updated last year
- A medical imaging framework for Pytorch☆871Apr 26, 2024Updated last year
- Medical imaging processing for AI applications.☆2,364Feb 10, 2026Updated 3 weeks ago
- Deep Learning Toolkit for Medical Image Analysis☆1,451Mar 24, 2023Updated 2 years ago
- Jupyter notebooks for learning how to use SimpleITK☆900Feb 12, 2026Updated 2 weeks ago
- SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, educati…☆1,044Updated this week
- tracking medical datasets, with a focus on medical imaging☆896Mar 28, 2025Updated 11 months ago
- ☆8,076Feb 18, 2026Updated 2 weeks ago
- ☆395Jun 23, 2025Updated 8 months ago
- Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans☆1,057Aug 4, 2024Updated last year
- Active Deep Learning for Medical Imaging Segmentation☆280Nov 22, 2022Updated 3 years ago
- Advanced Normalization Tools (ANTs)☆1,428Updated this week
- AI Toolkit for Healthcare Imaging☆7,887Updated this week
- Medical image registration using deep learning☆614Dec 15, 2022Updated 3 years ago
- Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet projec…☆2,184Nov 27, 2025Updated 3 months ago
- A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation☆1,900Jul 25, 2024Updated last year
- [unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy☆1,381Apr 21, 2020Updated 5 years ago
- The Medical Imaging Interaction Toolkit.☆804Feb 26, 2026Updated last week
- How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study☆401Apr 30, 2021Updated 4 years ago
- A program to evaluate the quality of image segmentations.☆328Dec 25, 2021Updated 4 years ago
- Read, modify and write DICOM files with python code☆2,141Updated this week
- ☆358Feb 15, 2026Updated 2 weeks ago
- [MICCAI 2019 Young Scientist Award] [MEDIA 2020 Best Paper Award] Models Genesis☆773Jun 22, 2025Updated 8 months ago
- A collection of loss functions for medical image segmentation☆4,004Nov 1, 2023Updated 2 years ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆148Jun 10, 2025Updated 8 months ago
- Official code for "Boundary loss for highly unbalanced segmentation", runner-up for best paper award at MIDL 2019. Extended version in Me…☆720Mar 19, 2024Updated last year
- Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…☆1,384Oct 27, 2025Updated 4 months ago
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,502Feb 11, 2026Updated 3 weeks ago
- A list of Medical imaging datasets.☆2,515Sep 12, 2024Updated last year
- The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge☆181Apr 17, 2023Updated 2 years ago
- nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without ma…☆631Oct 27, 2025Updated 4 months ago
- Deep Learning Papers on Medical Image Analysis☆1,609Apr 1, 2022Updated 3 years ago
- code for MICCAI 2019 paper 'Uncertainty-aware Self-ensembling Model for Semi-supervised 3D Left Atrium Segmentation'.☆531Nov 13, 2020Updated 5 years ago
- TMI 2018. H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation from CT Volumes☆573Dec 8, 2022Updated 3 years ago
- Python package to access a cacophony of neuro-imaging file formats☆765Updated this week
- abdominal multi-organ segmentation using pytorch☆133Apr 27, 2019Updated 6 years ago