cMadan / openMorphLinks
Curated list of open-access databases with human structural MRI data
☆129Updated 6 years ago
Alternatives and similar repositories for openMorph
Users that are interested in openMorph are comparing it to the libraries listed below
Sorting:
- Preprocessing scripts for neuro imaging☆110Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆100Updated last week
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆335Updated last week
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆96Updated 5 months ago
- A framework for developing neural network models for 3D image processing.☆165Updated 2 weeks ago
- Configurable Pipeline for the Analysis of Connectomes☆68Updated this week
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 2 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆149Updated this week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆126Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 2 weeks ago
- Preprocessing of diffusion MRI☆162Updated last week
- Automated Fiber Quantification☆77Updated last year
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆47Updated this week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆182Updated 2 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆74Updated 3 weeks ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆45Updated 12 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆60Updated 11 months ago
- niimath - a clone of fslmaths. Try the live demo:☆68Updated 3 weeks ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆101Updated 2 months ago
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆29Updated last month
- defacing utility for MRI images☆126Updated last year
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Multi-site dMRI harmonization☆49Updated 3 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated last week