flatironinstitute / dendro-oldLinks
Analyze neuroscience data in the cloud
☆18Updated last year
Alternatives and similar repositories for dendro-old
Users that are interested in dendro-old are comparing it to the libraries listed below
Sorting:
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆63Updated this week
- Browser-based NWB visualization and DANDI exploration☆59Updated this week
- ☆52Updated last year
- Web app for viewing results of ephys spike sorting☆26Updated 2 weeks ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 6 months ago
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last month
- Collection of probe description for probeinterface☆16Updated 2 months ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆103Updated this week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆103Updated this week
- A package to manage electrophysiology analysis.☆23Updated this week
- Histology processing☆69Updated this week
- Open Neurophysiology Environment☆21Updated this week
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆12Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 11 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 7 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 2 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- IBL core shared libraries☆63Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 3 months ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- A modular package to control stimulation and track behaviour☆46Updated 10 months ago
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆17Updated last month