Constant pH simulation with OpenMM
☆20Mar 10, 2026Updated 3 months ago
Alternatives and similar repositories for openmm-cph
Users that are interested in openmm-cph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software for the prediction of DEER and PRE data from conformational ensembles.☆14May 6, 2025Updated last year
- The OpenMM Cookbook and Tutorials☆58Apr 28, 2026Updated 2 months ago
- An application for configuring and running simulations with OpenMM☆81Oct 30, 2025Updated 8 months ago
- ☆54Apr 1, 2025Updated last year
- a quick primer on making prettier (and more impactful) plots☆14Sep 27, 2015Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆20Jan 9, 2023Updated 3 years ago
- Package for consistent reporting of relative free energy results☆42Jun 17, 2026Updated 2 weeks ago
- ☆17Jul 28, 2022Updated 3 years ago
- a python package for the interfacial analysis of molecular simulations☆95Jun 11, 2026Updated 3 weeks ago
- CHARMM and AMBER forcefields for OpenMM (with small molecule support)☆372Jun 25, 2026Updated last week
- Recipes and protocols for molecular free energy calculations using the openmmtools/perses and Open Free Energy toolkits☆19Jun 25, 2026Updated last week
- Machine learning workflows for the OpenADMET project☆55Updated this week
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆32Oct 6, 2022Updated 3 years ago
- Solvent network analysis. Hop is a python package based on MDAnalysis to analyze solvation dynamics.☆15Sep 20, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Repository for the 2024 OpenFE industry benchmark efforts☆42Oct 3, 2025Updated 9 months ago
- Integrating Molecular Simulation and Experimental Data☆27Sep 19, 2021Updated 4 years ago
- Experiments with expanded ensembles to explore chemical space☆202Oct 28, 2025Updated 8 months ago
- Useful Collective Variables for OpenMM☆18May 9, 2024Updated 2 years ago
- Protein ribbon plots implemented in Julia using Makie☆25Jun 22, 2026Updated last week
- A set of tools for analyzing molecular dynamics simulations☆13Jun 24, 2026Updated last week
- ☆64Dec 10, 2025Updated 6 months ago
- A drop-in replacement for Rosetta Relax☆29Jan 30, 2026Updated 5 months ago
- nanobody melting temperature prediction using protein embeddings☆13Feb 24, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python based scripts for D3R grand challenge 2 analysis☆16Apr 25, 2017Updated 9 years ago
- A comprehensive toolkit for predicting free energies☆61Jan 10, 2025Updated last year
- a Python program for running QM/MM simulations using Q-Chem and OpenMM☆16Apr 24, 2022Updated 4 years ago
- An interface for generating simple crystal structures for molecular dynamics simulations.☆16Aug 25, 2025Updated 10 months ago
- Times Square Sampling☆13Feb 24, 2023Updated 3 years ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆363Mar 21, 2026Updated 3 months ago
- Automated tools for submitting molecules to QCFractal☆26Jun 25, 2026Updated last week
- ☆23Aug 25, 2023Updated 2 years ago
- PLMFit platform for TL on PLMs☆21Aug 13, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated last year
- ELViM is a method for visualizing the energy landscapes of biomolecules simulations.☆14Aug 18, 2025Updated 10 months ago
- Workshops on Computational Biology organized by our lab☆10Mar 25, 2024Updated 2 years ago
- protein folding app running on modal☆39May 30, 2026Updated last month
- easyPARM is a computational tool developed to simplify the derivation of force field parameters for metal-containing molecular systems an…☆44May 21, 2026Updated last month
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- ☆17Jan 13, 2026Updated 5 months ago