LEMMA (Linear Environment Mixed Model Analysis) aims to uncover GxE interactions between SNPs and a linear combination of multiple environmental variables.
☆13Apr 22, 2023Updated 3 years ago
Alternatives and similar repositories for LEMMA
Users that are interested in LEMMA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gene Environment Interaction Estimator☆13Dec 11, 2025Updated 7 months ago
- Source code for the GWAS Diversity Monitor☆16Updated this week
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆14Sep 3, 2019Updated 6 years ago
- A flexible tool for the multi-resolution localization of causal variants across the genome☆11Feb 19, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆14Apr 14, 2026Updated 3 months ago
- Customized codes used in Tibetan wheat sequencing project.☆13Oct 18, 2022Updated 3 years ago
- ☆27Oct 8, 2025Updated 9 months ago
- Miscellaneous genomics tools and data structures☆15Jul 26, 2024Updated last year
- A tool for phasing and imputing haplotypes in 10k+ low coverage sequencing samples☆10Nov 20, 2020Updated 5 years ago
- Hyphenate your way to glory! Or centrality.☆12Jul 24, 2025Updated last year
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆11Jun 10, 2019Updated 7 years ago
- Repository for the paper "Bayesian Model Selection of Lithium-Ion Battery Models via Bayesian Quadrature"☆14Apr 3, 2024Updated 2 years ago
- A web application for modeling the distribution and effects of drugs.☆11Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Pipelines for processing malaria parasite and mosquito genome sequence data.☆15Nov 2, 2024Updated last year
- Metric learning-based graph-partitioned trajectory inference from single-cell data☆12Apr 28, 2023Updated 3 years ago
- Pipeline to calculate icSHAPE score in genome with sliding window strategy☆13Aug 23, 2022Updated 3 years ago
- Repository of GESIS Shiny Workshop.☆11Jun 6, 2025Updated last year
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- ☆27Dec 4, 2017Updated 8 years ago
- find route between locations by mouse click on map☆10Nov 28, 2022Updated 3 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 6 months ago
- Newick tree processing☆13Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Project bulk/single-cell RNA-seq data to given LSI space☆12Jan 17, 2022Updated 4 years ago
- dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organ…☆22Jan 20, 2025Updated last year
- ☆15Jun 11, 2018Updated 8 years ago
- several scripts for bioinformatics☆25Nov 27, 2025Updated 7 months ago
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 2 months ago
- Research References Tracking Tool☆15Dec 8, 2022Updated 3 years ago
- Development of an NLP algorithm to temporally track patient emotional state using digital footprint☆13May 27, 2020Updated 6 years ago
- An R package for generating additional bioclimatic variables☆14Updated this week
- ☆14Jun 21, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GOAT: efficient and robust identification of gene set enrichment☆15Jul 11, 2026Updated 2 weeks ago
- See https://biometris.github.io/statgenGxE for a full description☆13Nov 12, 2025Updated 8 months ago
- ☆22Jul 25, 2023Updated 3 years ago
- Effective Computing—Resources for Computational Biologists☆26Apr 17, 2020Updated 6 years ago
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆30Sep 13, 2023Updated 2 years ago
- tabix file access with golang using biogo machinery☆10Jul 1, 2025Updated last year
- ☆17Jul 13, 2024Updated 2 years ago