lob-epfl / sofitoolLinks
SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging
☆16Updated 8 years ago
Alternatives and similar repositories for sofitool
Users that are interested in sofitool are comparing it to the libraries listed below
Sorting:
- Single-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016☆17Updated 6 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- widget for PSF simulation with aberrations☆25Updated last year
- python functions for simulating optical transfer functions☆76Updated last year
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆34Updated last week
- Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.☆10Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 10 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Updated 6 years ago
- ☆14Updated 5 years ago
- Fast and accurate aberration estimation from 3D bead images using convolutional neural networks☆21Updated 3 years ago
- OpenSIM matlab code☆54Updated 9 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆31Updated 11 months ago
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆95Updated 3 weeks ago
- 3D quantitative label-free imaging with phase and polarization☆17Updated 4 months ago
- STED simulation platform written in Python☆13Updated 11 months ago
- A package for processing diSPIM images with GPU implementation☆14Updated 3 years ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.☆14Updated 2 months ago
- code of the registration and deconvolution project☆35Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆27Updated 10 months ago
- Image deconvolution algorithms in python☆24Updated 3 years ago
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆42Updated 11 months ago
- Collection of literature, math, etc. for Structured Illumination Microscopy☆10Updated 6 years ago
- Musical for ImageJ☆10Updated 2 years ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆51Updated last month
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14Updated 5 years ago
- Official MATLAB implementation of the "SACD" -v0.2.0☆18Updated last year
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆80Updated 3 weeks ago
- Online available files of "A practical guide to fast structured illumination microscopy"☆17Updated 9 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Updated 2 years ago
- Things we use regularly☆29Updated last month