lob-epfl / sofitoolLinks
SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging
☆16Updated 9 years ago
Alternatives and similar repositories for sofitool
Users that are interested in sofitool are comparing it to the libraries listed below
Sorting:
- Single-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016☆18Updated 7 years ago
- python functions for simulating optical transfer functions☆80Updated last year
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54Updated last year
- Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.☆13Updated 3 years ago
- widget for PSF simulation with aberrations☆25Updated 2 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆32Updated last year
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆98Updated last week
- ☆15Updated 5 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆29Updated 3 months ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆47Updated 3 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆39Updated 7 years ago
- code of the registration and deconvolution project☆37Updated 4 years ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆40Updated this week
- Collection of literature, math, etc. for Structured Illumination Microscopy☆10Updated 6 years ago
- OpenSIM matlab code☆57Updated 9 years ago
- Fast and accurate aberration estimation from 3D bead images using convolutional neural networks☆23Updated 3 years ago
- STED simulation platform written in Python☆14Updated last year
- A package for processing diSPIM images with GPU implementation☆14Updated 4 years ago
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆45Updated 2 months ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.☆16Updated 6 months ago
- 3D quantitative label-free imaging with phase and polarization☆18Updated 8 months ago
- Online available files of "A practical guide to fast structured illumination microscopy"☆18Updated 9 years ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆55Updated 3 months ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆108Updated 7 years ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14Updated 5 years ago
- Image deconvolution algorithms in python☆23Updated 3 years ago
- Things we use regularly☆29Updated 5 months ago
- Multiscale Image Restoration for fluorescence microscopy☆10Updated 2 years ago
- Java (ImageJ/Fiji) software package for 3D deconvolution microscopy☆63Updated 6 years ago
- Information driven structured illumination microscopy using noise-controlled image reconstructions☆13Updated 4 years ago