iVis-at-Bilkent / newt
A web application to visualize and edit pathway models
☆53Updated last week
Related projects ⓘ
Alternatives and complementary repositories for newt
- A web application to visualize and edit the pathway models represented by SBGN Process Description Notation☆15Updated last week
- A web based visualization tool for process description maps in SBGN☆35Updated last week
- PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways☆55Updated 7 months ago
- Collection of scripts that include programmatic io and control of Cytoscape☆81Updated 2 months ago
- SyBLaRS: Systems Biology Layout & Rendering Service☆12Updated 3 months ago
- Network visualization webapp.☆13Updated last year
- KnetMiner - webapp to search and visualize genome-scale knowledge graphs☆25Updated this week
- Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project☆112Updated 2 months ago
- A Cytoscape.js extension to provide context menu around elements and core instance☆87Updated 2 months ago
- BioThings API framework - Making high-performance API for biological annotation data☆46Updated this week
- Core App: REST API module for Cytoscape☆30Updated last year
- DNA/RNA/AA sequence manipulation utility functions☆19Updated last year
- neXtProt protein sequence viewer (javascript) - From SIB CALIPHO group; neXtProt project☆50Updated last year
- Pviz☆69Updated 8 years ago
- KnetMaps: a BioJS component to visualize biological knowledge networks☆10Updated last year
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆50Updated this week
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Updated 6 years ago
- A Cytoscape.js extension to export the current graph view as an SVG.☆35Updated 7 months ago
- API for linked biological knowledge☆64Updated 2 years ago
- A Cytoscape.js extension to provide an undo-redo framework☆46Updated 3 years ago
- A container for the forna visualization software.☆18Updated 5 months ago
- A Knowledge Graph-based Semantic Database for Biomedical Sciences☆28Updated 6 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆27Updated last year
- Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++☆15Updated last month
- Euler is a fast, high-quality force-directed (physics simulation) layout for Cytoscape.js☆31Updated 2 months ago
- The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.☆126Updated last year
- Bio4j abstract model and general entry point to the project☆119Updated 7 years ago
- A Cytoscape.js extension to expand/collapse nodes for better management of complexity of compound graphs☆126Updated 2 months ago
- JavaScript-based pathway viewer and editor☆33Updated last year
- Convert genbank, fasta, sbol to JSON and back again!☆34Updated last year