liimy1 / DeepTMLinks
Prediction of protein melting temperatures directly from sequences
☆10Updated last year
Alternatives and similar repositories for DeepTM
Users that are interested in DeepTM are comparing it to the libraries listed below
Sorting:
- A Python framework for the rapid modeling of glycans☆17Updated last month
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated last month
- Modelling protein conformational landscape with Alphafold☆54Updated 3 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆51Updated this week
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 8 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago
- ☆38Updated 8 months ago
- ☆25Updated 6 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated last week
- Explicit crosslinks in AlphaFold 3☆23Updated 8 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated 11 months ago
- bakerlab pymol scripts☆25Updated 5 years ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 6 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆41Updated last year
- ☆61Updated last month
- ☆29Updated 2 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆22Updated 9 months ago
- Molecular Dynamics for Experimentalists☆65Updated 3 weeks ago
- Repo of AntiBMPNN project for antibody sequence design.☆21Updated 6 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- Analysis of alphafold and colabfold results☆32Updated this week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆68Updated 5 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- PPI version of Pythia☆25Updated 2 months ago
- Making Protein folding accessible to all!☆24Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- ☆41Updated last year
- ☆46Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆25Updated 3 months ago