Alternatives and similar repositories for MDplot

Users that are interested in MDplot are comparing it to the libraries listed below

• abeebyekeen / CHAPERONg
  CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses
  ☆49Updated 5 months ago
• ChemBioHTP / EnzyHTP
  EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling
  ☆25Updated this week
• paiardin / DockingPie
  A Consensus Docking Plugin for PyMOL
  ☆73Updated last year
• intbio / gromacs_ff
  Trusted force field files for gromacs
  ☆52Updated 7 months ago
• mangeshdamre / Free-Energy-Landscape
  ☆12Updated 4 years ago
• maxscheurer / pycontact
  Analysis of non-covalent interactions in MD trajectories
  ☆58Updated 5 months ago
• Valdes-Tresanco-MS / AMDock-win
  (Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina
  ☆67Updated 2 years ago
• wells-wood-research / drMD
  Molecular Dynamics for Experimentalists
  ☆57Updated this week
• MiaoLab20 / gamd-openmm
  Gaussian Accelerated Molecular Dynamics (GaMD) is a computational method for both unconstrained enhanced sampling and free energy calcula…
  ☆82Updated 2 months ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• Valdes-Tresanco-MS / AMDock
  (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina
  ☆69Updated last year
• forlilab / Ringtail
  Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina
  ☆48Updated last week
• ci-lab-cz / streamd
  Fully automated high-throughput MD pipeline
  ☆61Updated last week
• ci-lab-cz / pharmd
  MD pharmacophores and virtual screening
  ☆33Updated last year
• HITS-MBM / conan
  Analysis of contacts in molecular dynamics trajectories
  ☆42Updated 5 years ago
• huichenggong / Learning-Computation-with-Chenggong
  ☆39Updated 11 months ago
• aspitaleri / gmxpbsa
  MM/PBSA binding free energy calculation
  ☆23Updated last year
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆85Updated 4 years ago
• fhh2626 / BFEE2
  binding free energy estimator 2
  ☆119Updated last month
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆69Updated 2 months ago
• wolberlab / OpenMMDL
  Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes
  ☆135Updated last week
• CharlesHahn / DuIvy
  some scripts for analysis of MD and CADD. And some tutorials.
  ☆54Updated 10 months ago
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆74Updated 3 years ago
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆63Updated 2 years ago
• czodrowskilab / VSFlow
  ☆91Updated 4 months ago
• dseeliger / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆62Updated 4 years ago
• CharlesHahn / DuIvyTools
  A Tool to process and visualize the results of molecular dynamics simulations(GROMACS).
  ☆74Updated 10 months ago
• ccsb-scripps / ADCP
  AutoDock CrankPep for peptide and disordered protein docking
  ☆50Updated 4 years ago
• bioexcel / biobb
  Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…
  ☆59Updated last week
• tubiana / screening_protocol
  Screening protocol with AUTODOCK-GPU
  ☆12Updated 2 years ago